Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00347 ATGAGCCTACGCAAGGGCTCTAAGGTTTGGGTGGAAGACAGGGATTCTGCTTGGGTGGCTGGTGAAGTCACCGAGTTCGGCGGTAAACAAGCTCGAGTTGCAACTATTACTGGAAAGAAGGTCTTGGCTCTTCCTGAGAAGCTTTTGCCGAGGGATGCGGATGAGGACGAGCATGGAGGGGTGGATGATATGACGAAGTTGACCTATTTGAATGAGCCTGGGGTGCTTTATAATCTTCGAAGAAGATATTCTCTCAATGACATATATACATACACAGGTAGCATTTTGATTGCTGTTAATCCATTCACAAAGCTTCCCCATCTATACAATGTTCACATGATGGAGCAGTACAAGGGAGCACCTTTTGGGGAACTGAGCCCCCATGTTTTTGCAGTTGCTGATGCATCCTATAGAGCAATGATTAGTGAGGGTCGAAGCCAATCAATATTGGTCAGTGGAGAGAGTGGTGCAGGGAAAACCGAGACAACAAAATTGATTATGCAGTATCTTACATTTGTTGGAGGTCGAGCGTCTGGCAATGACAGAACTGTTGAGCAACAAGTTCTTGAATCAAATCCTTTACTGGAAGCATTTGGTAATGCAAGGACAGTTAGAAACGATAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATACGAATGGTAGAATATCGGGTGCTGCAATTAGAACTTATCTTCTAGAACGTTCTCGTGTTGTGCAAATTACGAACCCTGAGAGGAACTATCATTGTTTTTATCAGCTATGTGCATCTGGCAGGGATGCAGAGAAGTACAAGTTAGACCACCCAAGTCATTTTCGATACTTAAATCAAAGCAAGACCTATGAATTAGATGGAGTGAGCAATGCTGAGGAGTATATTAGGACAAGGAGGGCAATGGATATAGTTGGTATCAGCCATGAGGATCAGGAAGCTATCTTTCGTACCTTGGCTGCAATTTTGCATTTGGGGAACATTGAGTTTTTGCCTGGAAAAGAACACGACTCTTCCATCTTGAAGGATGAAAAGTCTACCTTTCATTTAGGGGTGGCTTCTAATCTTCTCATGTGTAATTCCAACCTCTTGGTCTCAGCCCTTTGTACTCGTTCAATTCATACTCATGAAGGAATTATTGTCAAAGCGCTAGATTGTGAAGGTGCCGTTGCTAGTCGAGATGCATTGGCAAAGACTGTTTACGCTCGTCTGTTTGATTGGCTTGTTGATAAGATCAACCGATCTGTCGGACAAGATCCAAATTCTCAATTTCAAATTGGGTTATTGGACATTTATGGTTTTGAATGCTTTAAGGACAATAGTTTTGAGCAGTTTTGCATCAATTTTGCGAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTGTTTAAGATGGAGCAGGAAGAGTATAGCAAAGAGGAAATAAATTGGAGCTACATTGAATTCATCGACAATCAGGATGTGTTGGATTTGATTGAGAAGAAACCTATTGGGATCATTGGTTTGCTGGATGAGGCTTGCCTGTTTCCAAGATCAACTCATGAAACATTCTCAACCAAATTATTTCAGAACTTTCATACTCACCCAAGGTTGGAAAGAACAAAATTTTCAGAAACAGATTTCACTCTTTCCCATTATGCTGGAAAGGTCACTTATCATACAGACACCTTTTTAGATAAAAATCGTGATTATGTTGTGGTAGAGCATTGCAGTCTATTGGCTTCTTCTAGATGCACTTTTGTTGCTGGCCTTTTCTCTTCCGTTCCAGAGGAATCTTCAAGATCATCGTATAAATTTTCTTCTGTAGCCTCAAGATTTAAGCAACAACTTCAAGCACTTATGGAGACACTGAATTCTACTGAGCCCCATTATGTACGCTGTGTGAAGCCAAATTCTCTTAATAAGCCCCAGAAGTTTGAGAACCCAAGCATTCTGCATCAATTACGCTGTGGGGGTGTTTTGGAAGCTGTTCGAATAAGTCTTGCAGGTTATCCCTCCAGAAGAACTTATACAGAGTTTATTGACCGTTTTGGTTTGTTGGCTCCTGATTTATTGGATGGAAGCTACGATGAAAGGTTGATAACAGAAAAAATTCTACAAAAGTTGAAGCTAAAAAATTTTCAGTTAGGTAGGACCAAAATATTTCTTAGGGCTGGTCAAATTGGCATTCTGGATGCTCGAAGAGCTGAAGTATTGGATAATGCTGCGAAGTGTATTCAACGCCGATTACAAACATATCATGCGCGCAAGGATTTTTTATTGATGCGTTCTACTGCAATTTCACTTCAAGCATACTGCAGAGGATGCCTTGCCCGAAAGTTTTATGTTGCGAAACGAGAAAGTGCTGCTGCCACTACGATACAGAAATATATTCGCAGGTGGTTCTCCAGGAATACTTATTTGGAGCTCTATAAAGCTGCTCTAACCATACAGTCCAGTATTCGTGGTTTTACGACTCGCAAAAGGTTTTTGCATGATAGAAGAAATAAAGCTGCGATATCAATTCAGGCTCAATGGAGGACATTCAAGGTTCGTACTGTTTTCCATCGCCACCAAGCTTCTATTATTTCAATACAATGTCGATGGAGGCAAAAGCTTGCAAAAAGGGAACTTCGAAGACTTAAACAGGAAGCTAATGAAGCTGGAGCATTGCGTTTAGCTAAGAACAAACTTGAGAAGCAGTTGGAAGATCTTACGTGGCGGTTGCATTTGGAGAAAAGACTGCGGGCTTCTAATGAAGAGGCTAAGTCAAACGAAATATTAAAATTGCAAAAGATGCTGGAATCTTTGAGTCTGGAGTTAGATGCAGCTAAATTTGCTGCAATCAATGAGTGCAACAAAAATGCTGTTCTGCAAAACCAAATGGATCTGTTGGCAAAGGAGAAGTATGCATTTGAAAGAGAAATTGTAGCAGTAGTTGAACTAAAGAAAGAAAATGCTTTCCTCAAGAGTGCTTTGGATGCCCTGGAGAAAAAGAACTCAGCTCTGGAGGTTAAGCTTGTTGAGGCACAAAAGGATGGCAGCCACACTGTTGAAAAGTTGCAGGAGGTTGAACAGAAATGCACTAAGCTGCAACATAATGTGAAAAGTCTCGAAGAAAAACTCTCAGTTTTAAAGGATGAGAATCACGTATTGCGGCAGAAAGCCTTAAGTGCAACTCCGAGGAGCACCCGACCCAATTTTGTAAGGGCATTATCTGAGAAATCTTCTGGTGCACTTATCCCTAATGCTGACAGGAAAACTCTCTTTGAGTCACCAACACCTACAAAACTGGTTGCACCATTTTCACAAGGCCTTTCCGAATCACGACGAACAAAATTAACTGTAGAGAGACACCAGGAAAACTATGAACTCCTTTCTAGGTGTATTAAAGAAAATTTGGGGTTTAAAGGTGGTAAGCCACTGGCCGCTTGCATCATCTACAAATGCCTTCTTAACTGGCATGCCTTCGAATCAGAACGAACAGTTATCTTTGACTACATAATTGAACGAATAAATGATGCCCTCAAGGTTGGGGATGAGAACATTGCCTTGTCATATTGGTTGTCAAACGCTTCTGCATTACTATGCCTCCTGCAAAGAAATATAAAGTCAAATGGATTTTTGAGTGCAGCTACTCAGCGTTCTGCAGGTTCTACTGGCTTAGCTAGCAGGATTTCTCAGGGACTAAAATCACCCTTCAAATATATTACTTTTGAAGATGGGATTTCTCATCTTGAAGCAAGATATCCGGCTATATTGTTTAAACAGCAATTAACTGCTTGTGTGGAGAAGATATTCGGCATGATTCGTGACAATTTGAAGAAAGAATTGTCTCCATTGTTGAGCTCATGTATTCAGGCACCCAAAGCTGCACGAGTACATGCTGGGAAGTCCTCTAAATCGCCTGGTGTTCCTCAGCCATCTACAAGTAGTCCATGGGATAACATAATAAAGTTTTTGGATTCTTTGATGAGTCAATTACGTGAGAATCATGTACCGTCTTTCTTCATTCGTAAATTGATTACTCAGGTGTTCTCGTTCATCAATATTTCTCTTTTTAACAGCCTTCTTCTACGACGTGAATGTTGTACGTTTTCAAATGGCGAGTATGTGAAATCTGGTCTAGCTGAACTAGAGAAGTGGATTGGCAATGCAACAGATGAGTATTCAGGGACCTCTTGGCATGAACTAAACTATATAAGGCAATCTGTCGGGTTTCTGGTAATACATCAGAAGAGAAAGAAATCACTTGAAGAGATAAGACAGGATCTTTGCCCTCAGGCATTGACTACTGAGACAATATGGCTTATCCGCATTAGACTAATGTATTGGGATGACAAATACGGCACTCAGAGCGTGTCAAACGAGGCAAAAGTAGTCTCATTTGCTTACTTGGCGAACAACGATTCTTTCTGA 4398 40.84 MSLRKGSKVWVEDRDSAWVAGEVTEFGGKQARVATITGKKVLALPEKLLPRDADEDEHGGVDDMTKLTYLNEPGVLYNLRRRYSLNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGNDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITNPERNYHCFYQLCASGRDAEKYKLDHPSHFRYLNQSKTYELDGVSNAEEYIRTRRAMDIVGISHEDQEAIFRTLAAILHLGNIEFLPGKEHDSSILKDEKSTFHLGVASNLLMCNSNLLVSALCTRSIHTHEGIIVKALDCEGAVASRDALAKTVYARLFDWLVDKINRSVGQDPNSQFQIGLLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIGLLDEACLFPRSTHETFSTKLFQNFHTHPRLERTKFSETDFTLSHYAGKVTYHTDTFLDKNRDYVVVEHCSLLASSRCTFVAGLFSSVPEESSRSSYKFSSVASRFKQQLQALMETLNSTEPHYVRCVKPNSLNKPQKFENPSILHQLRCGGVLEAVRISLAGYPSRRTYTEFIDRFGLLAPDLLDGSYDERLITEKILQKLKLKNFQLGRTKIFLRAGQIGILDARRAEVLDNAAKCIQRRLQTYHARKDFLLMRSTAISLQAYCRGCLARKFYVAKRESAAATTIQKYIRRWFSRNTYLELYKAALTIQSSIRGFTTRKRFLHDRRNKAAISIQAQWRTFKVRTVFHRHQASIISIQCRWRQKLAKRELRRLKQEANEAGALRLAKNKLEKQLEDLTWRLHLEKRLRASNEEAKSNEILKLQKMLESLSLELDAAKFAAINECNKNAVLQNQMDLLAKEKYAFEREIVAVVELKKENAFLKSALDALEKKNSALEVKLVEAQKDGSHTVEKLQEVEQKCTKLQHNVKSLEEKLSVLKDENHVLRQKALSATPRSTRPNFVRALSEKSSGALIPNADRKTLFESPTPTKLVAPFSQGLSESRRTKLTVERHQENYELLSRCIKENLGFKGGKPLAACIIYKCLLNWHAFESERTVIFDYIIERINDALKVGDENIALSYWLSNASALLCLLQRNIKSNGFLSAATQRSAGSTGLASRISQGLKSPFKYITFEDGISHLEARYPAILFKQQLTACVEKIFGMIRDNLKKELSPLLSSCIQAPKAARVHAGKSSKSPGVPQPSTSSPWDNIIKFLDSLMSQLRENHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIGNATDEYSGTSWHELNYIRQSVGFLVIHQKRKKSLEEIRQDLCPQALTTETIWLIRIRLMYWDDKYGTQSVSNEAKVVSFAYLANNDSF 1465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1988431 2012186 - Carg09312-RA Car05g00347 148733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00347 1465 ProSiteProfiles IQ motif profile. 755 784 IPR000048 GO:0005515
Car05g00347 1465 ProSiteProfiles IQ motif profile. 780 809 IPR000048 GO:0005515
Car05g00347 1465 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Car05g00347 1465 Pfam DIL domain 1334 1421 IPR002710 -
Car05g00347 1465 Coils Coil 972 1006 - -
Car05g00347 1465 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car05g00347 1465 Pfam Myosin head (motor domain) 61 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g00347 1465 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g00347 1465 ProSiteProfiles IQ motif profile. 803 832 IPR000048 GO:0005515
Car05g00347 1465 Coils Coil 1014 1048 - -
Car05g00347 1465 ProSiteProfiles IQ motif profile. 851 880 IPR000048 GO:0005515
Car05g00347 1465 Pfam IQ calmodulin-binding motif 782 800 IPR000048 GO:0005515
Car05g00347 1465 Pfam IQ calmodulin-binding motif 759 773 IPR000048 GO:0005515
Car05g00347 1465 Pfam IQ calmodulin-binding motif 830 848 IPR000048 GO:0005515
Car05g00347 1465 Pfam IQ calmodulin-binding motif 805 823 IPR000048 GO:0005515
Car05g00347 1465 Coils Coil 864 908 - -
Car05g00347 1465 ProSiteProfiles Dilute domain profile. 1159 1461 IPR002710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00347 Car-Chr5:1988431 Car08g00481 Car-Chr8:3048381 0 dispersed
Car05g00347 Car-Chr5:1988431 Car10g00670 Car-Chr10:3442085 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00347 K10357 - csv:101210527 2683.67