Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00358 ATGGAGGAGATGTCCTCAGCGGTTGTGGTGCCATTTAGGGTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAGCTACCCCCATGGATATCACAAGACTCAAGCTCATGGCGGATACTGCCGGTTTGTTATCCGACTCTGTGACGAAGGCTTCGGACGATTCGATTGAAGTAGTTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGATTAGTATTGCTGCTGTTTCGGTTACGAATGATGATAAGTGCGAAAGCGTTCCGTTATCGGTTGTGTTATCTCAAAGTAGTAGCAATTGGGTTGCGGCGGATGAGACGATATCGGTTGGATGTGAAGAAGATGATTGTTTATCTTTAGAAGGTGAACAGATTTATGATAGTTCTTGTTCACATTCAGTGGTTAGTGAAACTAGCAGCATTTGTGGTGATGATTTTTTAGGTACTGAGGTGTCGTTTTTCGAAGCGTTTGATTCGATTACCAATGCGAAGGACGTTAGTTGTGTCGAGATTGCAGCGAAAGGTAATATTGCGAGTTCATCTTCTGCAGTTGTTAGCCTTGAAGATGATGTTGGAGCATGTAATAACGTGGTTCTTCAGCTGCCTATTGAGGAAAGGGCGAACGAACCGGTTAGTCGAAGCGTTTTCGAGGTAGATTGTGTACCCCTTTGGGGATTTACGTCGGTATGTGGAAGAAGACCCGAGATGGAAGATGCTGTAGCAATGGTACCTAAGTTTTCAGAACTTCCTGTCGAAATGCTTGTTGGTGACCGAGTTTTCGATGGCTCGAGCAAGGCTATAGCTCATCAAACCGTTCATTTTTTCGGGGTTTATGATGGTCATGGTGGTTCTCAGGTCGCTAATTATTGTCGTGAACGTATGCATTTGGCTTTATCTGAGGAGATAGAACTTGCTAAGCAAGATATAGCTGCTGGTAATATAAAGGATGATTGTCAAGAGCTATGGAGAAAGGCATTCACCAAATGCTTTGTAAAAGTTGATGCTGAAATTGGAGGGGGACCTGGTGTTGAGCCTGTTGCACCAGAAACTGTTGGCTCCACTGCTGTTGTTGCCATTATCTGTGCATCTCATATCATTGTTGCAAATTGTGGCGACTCGAGAGCCGTTCTTTGTCGTCGGAAGGAGCCGATGGCATTGTCCGTGGATCACAAACCGAACAGAGAAGATGAATATGAACGGATTGAAGCTGCAGGTGGGAAGGTCATACAGTGGAACGGGCACCGTGTTTTTGGTGTTCTAGCGATGTCGAGATCGATCGGTGATAGATACTTGAAACCATGGATCATCCCGGAGCCAGAAGTGATGTTCATCCCTCGAGCGAAAGACGACGAATGTCTCGTTCTAGCCAGCGATGGTTTATGGGACGTGATGTCAAACGAAGAGGTATGCGACTTGGCTCGAAGACGAATCCTTCTTTGGCACAAGAAGAACGGTGTCAGTTTACCTTCTGAGAGAGGGGTGGGGATTGATCCTGCAGCCCAAGCAGCCGCAGAATATCTCTCGAAACGAGCTCTTCAAAAGGGCAGCAAAGACAACATCACGATCGTCGTGATCGATTTGAAAGCTCATTGGAAGTTCAAGACGAAATCATAA 1614 45.66 MEEMSSAVVVPFRVGNSVCDNPNMAATPMDITRLKLMADTAGLLSDSVTKASDDSIEVVSDDCKSSNGEEEISIAAVSVTNDDKCESVPLSVVLSQSSSNWVAADETISVGCEEDDCLSLEGEQIYDSSCSHSVVSETSSICGDDFLGTEVSFFEAFDSITNAKDVSCVEIAAKGNIASSSSAVVSLEDDVGACNNVVLQLPIEERANEPVSRSVFEVDCVPLWGFTSVCGRRPEMEDAVAMVPKFSELPVEMLVGDRVFDGSSKAIAHQTVHFFGVYDGHGGSQVANYCRERMHLALSEEIELAKQDIAAGNIKDDCQELWRKAFTKCFVKVDAEIGGGPGVEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRRKEPMALSVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFIPRAKDDECLVLASDGLWDVMSNEEVCDLARRRILLWHKKNGVSLPSERGVGIDPAAQAAAEYLSKRALQKGSKDNITIVVIDLKAHWKFKTKS 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2072008 2076167 - Carg09301-RA Car05g00358 148744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00358 537 ProSitePatterns PPM-type phosphatase domain signature. 274 282 IPR000222 GO:0043169
Car05g00358 537 Pfam Protein phosphatase 2C 229 520 IPR001932 -
Car05g00358 537 ProSiteProfiles PPM-type phosphatase domain profile. 223 527 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00358 Car12g00601 CCT
Car05g00358 Car12g00601 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00043 Car-Chr1:228882 Car05g00358 Car-Chr5:2072008 0 dispersed
Car02g01531 Car-Chr2:9839668 Car05g00358 Car-Chr5:2072008 9.12E-21 dispersed
Car05g00358 Car-Chr5:2072008 Car14g01106 Car-Chr14:9805623 3.21E-172 dispersed
Car08g00625 Car-Chr8:4007250 Car05g00358 Car-Chr5:2072008 6.70E-40 dispersed
Car12g00601 Car-Chr12:3966077 Car05g00358 Car-Chr5:2072008 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00358 K14497 - csv:101207918 906.746