Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00359 ATGCCTCCGCATCCACCGGAAGATGGGATTCCCTTGAACACCACGGCGGTGGCCATTGACAAGGATAAGAACAGCCAACACGCCGTCCGTTGGGCTATTGATCATCTGGTCATAAACAACCCGCTTATCATTCTCATCCATGTTAGGCATAAAGCTTATCAAAATCATCAGGACGCGGGCGATTCTGAAAATGGTGAAACTGATGCGCAGCAGCTGTTTGTTCCCTATCGTGGATATTGTGCTCGTAAAGGGGTTCAGCTGAAGGAGGTTGTTCTTGACGAACCTGATATTCCCAAAGCGCTCGTTGACTATGTTCACAAGAATTGTGTCAACAATTTTGTAGTTGGAGCTTCAACAAGGAGTGCTCTAGCAAGGAAATTTAAAGGCCCTGATGTTCCAACCAGCGTAATAAAAATTGCCCCAGAATTTTGTTCTGTGTACGTAATATCAAAAGGGAAGATAATATCTGCCAGGGCAGCTCTTCGGCCAGTGGCTAATACTGCCATGCCACCGAAACAACCGTCGCCGCTTGGAGTTCAGCCAATTGCTCTACCAGACAGCAGCAGTGAACAAGAAAACGGAGCCAAAGGGCAACCAGCGAAGGAAGGATGGAAATGTGCAGGTTCAGATAGAATGCTCAACGAAAGAAATGGTGGAAAGCCAGCAAAAGCGTTGACCCGCGAGAGACCGAAAACTTCTCCGTCTAATATATCAATAGAAAACGTAGAGGTTTCGAATCGAGGGCCTAGGTCTTCATTTAGCCGTGATTCAATCTCTGATGACAATCTGTTGAATGCACAGATGCCTTTTGGTTCATTGGACGTGAATGCTCAAAATTTAGATTTCAGTACTACCTCAAATTTGTCAACGGACTCTGCTTCCTCACAATCTACTCGGGAACTAGAGGCTGAGATGAAAAGATTGAAGTTGGAATTAAAGCAAACCATGGATATGTATAGCTCAGCCTGTAAAGAGGCAATCTCAGCCAAGAACAAGGCGAGAGAACTTAGTCAATGGAAGCAAGATGAGGCACGTAAGTTTGAGGAAGTCAGGCTAGCTGAAGAGGCCGCTCTAGCTATGGCTGAGATGGAGAAAGCCAAGTGCAAAGCTGCCATTGAAGCAGCAGAGGCAGCACAAAAGCTAGCCGAAAGAGAAGCCCAGAGAAGAAAACAGGCTGAAATCAAGGCCAAACGAGAGGCAGAAGAGAAAAAACGAGCATTGTGTGCTTTAGCTCAGAATGACGTCCGATATAGAAAATACACTATAGAGGAGATTGAAGAGTCTACTGAAAGGTTCTCTGAAAAATTGAAGGTTGGAGAAGGTGGATACGGTCCTGTTTATGTAGGCAAACTTGATCATACAGATGTTGCGATTAAAGTTTTAAGACCTGACGCTGCTCAAGGACGGAAGCAATTCCAGCAAGAGGTGGAGGTCCTTTGTTCTATTAGACATCCAAACATGGTCCTTCTTCTTGGGGCATGCCCTGAGTATGGTTGCTTAGTATATGAGTACATGCAGAATGGGAGCTTAGAAGACAGACTTTTCCGGAGAGGGAATACTCCTCCATTATCTTGGAGACGACGATTCAAAATATCTGCTGAAATTGCTACTGCACTCCTTTTTCTTCACCAAGCAAAGCCAGATCCGCTCGTGCATAGGGACCTTAAACCAGCTAACATTCTCTTGGACCGCAATTTTGTGAGCAAAATCAGTGATGTTGGCCTGGCCCGGTTAGTCCCACCTTCTGTAGTTGATCAAGTCACTCAATATCACCTGACTTCAGCAGCTGGCACATTTTGTTACATTGATCCCGAGTATCAACAAACAGGAAAGTTAACAACGAAATCGGATATTTACTCGTTTGGAATAATGTTACTTCAAATCATTACTGCCAAGCCTCCAATGGGTCTGGCTCACCATGTGCAAAGGGCTATTGAGAAAGAGAGGTTTGATGAGATGCTGGATCCTACAATTCCAGATTGTCCATTGGAGGAGGCTATAAGTTTTGCAAAACTGGCATTGAATTGCGCTGAACTGAGGAAGAGAGACAGGCCAGATCTTGGAACAGTTATAGTTCCAGAGCTCAACAGGTTAAGAGATCTTGGGAGGAGTTCTGACAAACGTGAAAGCCGGAGTCTACTTCTACGCTCTTCTGCATCAAGTTCCAATTCGAGGCCACAGTCATCAAATGAGGGAATTTCCAGGAAGGAATTGAGGAGGCAGCTTGGGAAGAACAGTATAAAGCAAGCATGA 2253 45.14 MPPHPPEDGIPLNTTAVAIDKDKNSQHAVRWAIDHLVINNPLIILIHVRHKAYQNHQDAGDSENGETDAQQLFVPYRGYCARKGVQLKEVVLDEPDIPKALVDYVHKNCVNNFVVGASTRSALARKFKGPDVPTSVIKIAPEFCSVYVISKGKIISARAALRPVANTAMPPKQPSPLGVQPIALPDSSSEQENGAKGQPAKEGWKCAGSDRMLNERNGGKPAKALTRERPKTSPSNISIENVEVSNRGPRSSFSRDSISDDNLLNAQMPFGSLDVNAQNLDFSTTSNLSTDSASSQSTRELEAEMKRLKLELKQTMDMYSSACKEAISAKNKARELSQWKQDEARKFEEVRLAEEAALAMAEMEKAKCKAAIEAAEAAQKLAEREAQRRKQAEIKAKREAEEKKRALCALAQNDVRYRKYTIEEIEESTERFSEKLKVGEGGYGPVYVGKLDHTDVAIKVLRPDAAQGRKQFQQEVEVLCSIRHPNMVLLLGACPEYGCLVYEYMQNGSLEDRLFRRGNTPPLSWRRRFKISAEIATALLFLHQAKPDPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVVDQVTQYHLTSAAGTFCYIDPEYQQTGKLTTKSDIYSFGIMLLQIITAKPPMGLAHHVQRAIEKERFDEMLDPTIPDCPLEEAISFAKLALNCAELRKRDRPDLGTVIVPELNRLRDLGRSSDKRESRSLLLRSSASSSNSRPQSSNEGISRKELRRQLGKNSIKQA 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2077727 2082410 + Carg09300-RA Car05g00359 148745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00359 750 MobiDBLite consensus disorder prediction 714 731 - -
Car05g00359 750 MobiDBLite consensus disorder prediction 166 259 - -
Car05g00359 750 ProSiteProfiles Protein kinase domain profile. 432 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00359 750 Coils Coil 298 318 - -
Car05g00359 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Car05g00359 750 Coils Coil 358 404 - -
Car05g00359 750 MobiDBLite consensus disorder prediction 707 750 - -
Car05g00359 750 MobiDBLite consensus disorder prediction 229 259 - -
Car05g00359 750 Pfam Protein tyrosine and serine/threonine kinase 437 690 IPR001245 GO:0004672|GO:0006468
Car05g00359 750 Pfam Universal stress protein family 17 141 IPR006016 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00359 Car12g00600 CCT
Car05g00359 Car12g00600 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00359 Car-Chr5:2077727 Car09g00466 Car-Chr9:2597386 0 dispersed
Car12g00262 Car-Chr12:1752480 Car05g00359 Car-Chr5:2077727 1.45E-31 wgd
Car12g00600 Car-Chr12:3959147 Car05g00359 Car-Chr5:2077727 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88874 PF07714 PK_Tyr_Ser-Thr 1.80E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00359 - - csv:101203326 1160.59