Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00374 ATGGACGACGGAGGAGCTTCTCAGCCGGACGACGCCTTCATGTCGGAGGCGGCGTCTATACCGTCGCAGCATGACCCGGCGGCGCACCAGCCGCCGTCGATGGGGATGGAAAATATTCCGGCGACTTTGAGCCATGGAGGGAGATTTATTCAGTACAATATCTTTGGTAACATCTTCGAAGTTACGGCTAAGTACAAGCCTCCCATTATGCCTATTGGCAAAGGCGCTTATGGCATCGTCTGTTCTGCTCTAAATTCCGAGACGAACGAGCACGTGGCGATCAAGAAGATTGCTAATGCGTTTGACAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATCAAGCTTCTTCGGCACATGGATCATGAAAACGTTGTTGCAATTAGGGATATCATACCTCCGCCTCTAAGGGAAACATTTAACGATGTTTATATAGCATATGAGCTGATGGATACCGATCTTCATCAAATAATTCGTTCAAACCAAGCACTATCAGAGGAGCATTGTCAGTATTTCCTGTACCAGATTCTTCGAGGATTGAAGTACATACATTCAGCAAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTGTTATTAAATGCCAACTGTGACCTGAAAATATGCGATTTTGGACTTGCTCGTGTTACTTCTGAAACCGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGCGCGCCAGAGCTCTTACTTAATTCATCTGACTACACAGCAGCTATCGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCCTTGTTTCCCGGTCGAGATCATGTGCATCAGTTACGCTTGCTTTTGGAGCTGATTGGCACTCCATCAGAGGCTGAACTCGGTTTCTTGAACGAGAATGCTAAAAGATACATACGCCAACTTCCTTATTACCATCGGCAGTCATTTACTGGAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGTTAACATTTGATCCAGGACAGAGAATTACCGTTGAAGATGCTCTAGCTCATCCTTATTTGACATCATTGCATGACATTAGTGATGAGCCTGTCTGCCTGACTCCCTTCAGCTTTGATTTCGAGCAGCACGCACTTACGGAGGAACAGATGAAAGAGCTGATCTATCGAGAGGCGCTTGCATTCAACCCCGAGTATTATCAGCAATAA 1200 45.42 MDDGGASQPDDAFMSEAASIPSQHDPAAHQPPSMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEAELGFLNENAKRYIRQLPYYHRQSFTGKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCLTPFSFDFEQHALTEEQMKELIYREALAFNPEYYQQ 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2136289 2142219 + Carg09285-RA Car05g00374 148760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00374 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Car05g00374 399 Pfam Protein kinase domain 71 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00374 399 ProSitePatterns MAP kinase signature. 101 204 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car05g00374 399 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00374 399 ProSitePatterns Protein kinases ATP-binding region signature. 72 96 IPR017441 GO:0005524
Car05g00374 399 MobiDBLite consensus disorder prediction 19 40 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00374 Car12g00580 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00374 Car-Chr5:2136289 Car15g01126 Car-Chr15:8878926 0 dispersed
Car12g00083 Car-Chr12:366900 Car05g00374 Car-Chr5:2136289 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88875 PF00069 Pkinase 3.40E-73 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00374 K14512 - csv:101204301 786.949