Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00393 ATGGTTGAGTATATGAAGAATATTGCAAAGCTTGACCTCGAACTAACTGTAGAGGAGAGGAACCTTCTTTCTGTGGGGTACAAAAATGTGATAGGTGCACGACGAGCCTCTTGGCGCATCATGTCTTCAATTGAGCAGAAGGAGGAGTCTAAGGGGAATGAGAACATTGTAAAATTGATAAAGAGTTACCGCCAGAAAGTTGAGGAGGAACTTTCAAAGATTTGTGGTGATATTCTCTCTATCATAGACAAGCATCTAATCCCTCATTCGTCTGCTGCAGAAGCCACTGTCTTCTACTACAAG 303 42.24 MVEYMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENIVKLIKSYRQKVEEELSKICGDILSIIDKHLIPHSSAAEATVFYYK 101
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2246184 2246488 + Carg09266-RA Car05g00393 148779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00393 101 ProSitePatterns 14-3-3 proteins signature 1. 20 30 IPR023409 -
Car05g00393 101 Pfam 14-3-3 protein 1 101 IPR023410 -
Car05g00393 101 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Car05g00393 101 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Car05g00393 101 PRINTS 14-3-3 protein zeta signature 94 101 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00393 Car-Chr5:2246184 Car11g01576 Car-Chr11:12512982 3.27E-53 dispersed
Car12g00098 Car-Chr12:528217 Car05g00393 Car-Chr5:2246184 1.76E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00393 - K06630 csv:101221858 190.66