Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00394 AAAGGTGATTACTATCGTTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAGGCTGCTGATCAGTCGTTGAAGGGATATGAGGCTGCCTCAGGCACTGCGAATACCGAACTCCCATCGACCCACCCAATCCGTCTTGGTCTTGCTCTCAACTTTTCTGTCTTCTACTATGAGATTATGAATTCTCCTGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAGGAATCGTACAAGGACAGCACTCTGATCATGCAGCTGTTGAGAGACAACCTTACACTCTGGACCTCAGATTTGCCTGAAGATGGC 345 45.8 KGDYYRYLAEFKTDQDRKEAADQSLKGYEAASGTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDG 115
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2246930 2247488 + Carg09265-RA Car05g00394 148780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00394 115 Coils Coil 68 88 - -
Car05g00394 115 PRINTS 14-3-3 protein zeta signature 27 53 IPR000308 -
Car05g00394 115 PRINTS 14-3-3 protein zeta signature 54 80 IPR000308 -
Car05g00394 115 PRINTS 14-3-3 protein zeta signature 81 110 IPR000308 -
Car05g00394 115 ProSitePatterns 14-3-3 proteins signature 2. 90 109 IPR023409 -
Car05g00394 115 Pfam 14-3-3 protein 1 108 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00394 Car-Chr5:2246930 Car19g00808 Car-Chr19:8705985 1.36E-71 dispersed
Car05g00394 Car-Chr5:2246930 Car12g00098 Car-Chr12:528217 2.82E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00394 - K06630 csv:101221858 233.802