Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00399 ATGTCATCACAAGCTCTCAACGCCCTTCTTCTCCACTTCCCCATTTCCATTACCCAAAGCTTCGAAGCTCTTCTTCTCAGCCTTCTTCTCGTCTCCATTTTCGCCTTCCTCCTCCACCCCGGCGGCCTCGCCTGGGCCATTTCCAAGTCCAAAACCACCGCCTCCGCCGCCATTCCCGGCCCTTCCGGCCTCCCATTCATCGGATTACTCCATGTCTTCACCCATTCAACCCCTCACAGAGCTCTCTCCGCCCTTGCCAATCGATTCAAAGCATACCCTTTAATGGCCTTCTCCGTTGGCCTTACAAGGTTCGTCATTTCTAGCAATCCTGATATTGCCAAGGAGATTCTAAACAGCCCTTCCTTTGCTGATAGACCTGTAAAGGAGTCCGCTTATGAGCTACTCTTTCACAGAGCAATGGGTTTTGCTCCTTATGGTGAGTATTGGAGGAATTTGAGGAGAATTTCAGCTACTTATATGTTTAATCCCAAGAGAATTGCTGGTTTTGAAGGGTTTAGGAGGGAAATTGGAGCTAAAATGATGAGGGAAATTGAGAAATCCATGGCTTTAAAAGGGGAAGTGAGAGTTAAAGAGATTCTTCATTTTGGGTCTTTGAATAACGTAATGATGATTGTTTTTGGTAAGTGTTATGAGTTTAATGGTGAAGGAACTGGGGCAGAGCTTGAGGAATTAGTAAGGGAAGGGTATGATCTTCTTGGGATATTCAATTGGAGTGACCATTTTCCCTTCTTGGGGTTCTTGGATTTACAAGGCGTGAGGAAAAGGTGTAGAGTTTTGGCTTCTAAGGTCAATATATTTGTCGGAAAAATCATTGAAGAACATAGAACAAAGAGGAAAGAACAAGAACATCAAGAACAAGAACAAAACAGAGATTTTGTCGATGTTCTGCTTGATTTGGAGAATGATGACAAGCTATCAGATTCCGACATGATTGCTGTTCTTTGGGAAATGATCTTTAGAGGGACCGACACAGTGGCGATACTTCTGGAGTGGATTTTAGCTCGAATGGTAAAACACCCAGAAATCCAAATGAAAGCCCAAAACGAAATCGATTCATTAATAGGCCAAAGCTCTCGACCCATTACAGATTCCGACATCCAAAATCTTCCATACCTTCAAGCTATTGTTAAAGAATGTCTTAGAATGCACCCACCAGGGCCACTTCTGTCATGGGCTCGACTAGCGACCGCCGACGTTCACGTCGGCGGCCGTGTGATTCCGGCGGGGACGACGGCGATGGTGAACATGTGGGCGATAACCCACAACGAGAGGGTTTGGTTAGAGCCAGAGAAATTCGAGCCAAATCGGTTCATGGAAGAGGAAATTAGTGTAATGGGGAGTGATTTGAGGTTGGCTCCATTTGGGGCAGGGCGAAGGGTTTGTCCGGGAAAGGCCATGGGTTTAGCCACCGTGCAGCTCTGGTTGGCTCAGCTGCTTCGAGCTTACAAATGGGTGACGTGTTCTGAAGAAGCCGCCATTAATGGCGGCGTAGATTTGTCAGAGTGCCTTAAACTCTCTCTGGAAATGGAAGCTCCTCTGGTTTGTAGAGCCATTGGGAGGAGGGTGGGTTTGGCAGAGGAATGA 1605 46.67 MSSQALNALLLHFPISITQSFEALLLSLLLVSIFAFLLHPGGLAWAISKSKTTASAAIPGPSGLPFIGLLHVFTHSTPHRALSALANRFKAYPLMAFSVGLTRFVISSNPDIAKEILNSPSFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATYMFNPKRIAGFEGFRREIGAKMMREIEKSMALKGEVRVKEILHFGSLNNVMMIVFGKCYEFNGEGTGAELEELVREGYDLLGIFNWSDHFPFLGFLDLQGVRKRCRVLASKVNIFVGKIIEEHRTKRKEQEHQEQEQNRDFVDVLLDLENDDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVKHPEIQMKAQNEIDSLIGQSSRPITDSDIQNLPYLQAIVKECLRMHPPGPLLSWARLATADVHVGGRVIPAGTTAMVNMWAITHNERVWLEPEKFEPNRFMEEEISVMGSDLRLAPFGAGRRVCPGKAMGLATVQLWLAQLLRAYKWVTCSEEAAINGGVDLSECLKLSLEMEAPLVCRAIGRRVGLAEE 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2272347 2274260 - Carg09260-RA Car05g00399 148785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00399 534 Coils Coil 278 298 - -
Car05g00399 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Car05g00399 534 Pfam Cytochrome P450 59 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00399 Car-Chr5:2272347 Car13g00900 Car-Chr13:9369615 0 dispersed
Car18g00648 Car-Chr18:7740965 Car05g00399 Car-Chr5:2272347 0 transposed
Car12g00103 Car-Chr12:552560 Car05g00399 Car-Chr5:2272347 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00399 K20619 - csv:101221468 871.692