Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00430 ATGGCGTTACAGAACATTGGTGCCTCAAACCGTGACGATGCCTTCTATAGGTATAAGATGCCTAGGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATCAAGACTAATGTAGTTAACATGGTGGACATTGCAAAAGCCTTGGGCAGACCTGCTGCTTACACTACCAAGTACTTCGGATGTGAGCTTGGCGCACAATCCAAGTTTGATGAGAAAACAGGTATTGCTCTTGTAAATGGAGCACATGAGACGGCGAAGTTGGCTGGTCTTCTCGAGAACTTCATCAAGAAATATGTTCAATGCTATGGTTGTGGAAACCCTGAAACTGAGATAATCATCACTAAGACGCAGATGATCAATATGAAATGTGCTGCTTGTGGATTCATATCTGATGTTGATATGAGAGATAAACTCACTACATTTATTCTGAAGAATCCTCCTGAACAGAAGAAGGGATCGAAAGACAAGAAAGCAATGAGGCGGGCTGAGAAGGAACGGCTTAAGGAAGGAGAGGCTGCTGATGAGGAACTGAAGAAAATAAAGAAGGATTCCCTGAAGAAGAAAAGCACTAGTGGTAATGCAAAGGAAGCTGTAACCAAAGTTCCAAGCAAGAAGAAGAGTAACGGCTCTGATGAGGATCATTCTCCAACTCGTAGCCATGCCGTTGAGAATGACCAAGCTGCTGATGACGACGACGACGACGACGATGTACAGTGGCAAACAGACACATCTTTGGAGGCAGCCAAGCAGCGTATTCAGGAGCAGTTGAGTGCTGTCACTGCTGATATGGTCATGCTCTCTACAACTGAAGAGACAAAGTCGTCAAAGAAGTCCCCCGAACACGAGAAGTCTGTGGTCAACGGAAGCAAGAATGGAAATGGAGTGTCTACCCATGGTGCCCTTGTTCATGAGATCAAAGATTATTTGAAGAAAAGTCCCTCTGCAGCCGATCTTAAATCATTCTTGGAGTCGCTTACTGGAACTCACCAAGAGACTGCGAATGCCTTAGTTGAGGCTCTATTTGAAGGAGTTGGTAAAGGGTTCTCAAAGGAGGTAGTGAAAAAGAAGAAGTTCCTGGTTGCAGTTGCAGCAGCTCAGGAGGAGGGATCACAGATAGTTCTGTTGCGTTCCATCGAATCTTTCTGTCTCAACACGAGTCCGGAGGCGGCTAAGGAGATCGCACTGGTCCTGAAATCGTTATACGATGGGGATGTAATAGAGGAGGAATTCGTGCTAGAGTGGTACCAGCAGGGACTGGCAGGAGCTAACAAAGGTAGCCAAATCTGGAAGCATGTAAAGCCGTTCATCGAGTGGCTCCAGAACGCAGAGTCGGAGACGGAAGAAGAGTAA 1350 45.85 MALQNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKALGRPAAYTTKYFGCELGAQSKFDEKTGIALVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMINMKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEELKKIKKDSLKKKSTSGNAKEAVTKVPSKKKSNGSDEDHSPTRSHAVENDQAADDDDDDDDVQWQTDTSLEAAKQRIQEQLSAVTADMVMLSTTEETKSSKKSPEHEKSVVNGSKNGNGVSTHGALVHEIKDYLKKSPSAADLKSFLESLTGTHQETANALVEALFEGVGKGFSKEVVKKKKFLVAVAAAQEEGSQIVLLRSIESFCLNTSPEAAKEIALVLKSLYDGDVIEEEFVLEWYQQGLAGANKGSQIWKHVKPFIEWLQNAESETEEE 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2466510 2467859 - Carg09228-RA Car05g00430 148816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00430 449 MobiDBLite consensus disorder prediction 199 225 - -
Car05g00430 449 MobiDBLite consensus disorder prediction 148 190 - -
Car05g00430 449 ProSiteProfiles W2 domain profile. 276 449 IPR003307 GO:0005515
Car05g00430 449 Pfam eIF4-gamma/eIF5/eIF2-epsilon 371 449 IPR003307 GO:0005515
Car05g00430 449 MobiDBLite consensus disorder prediction 143 238 - -
Car05g00430 449 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Car05g00430 449 MobiDBLite consensus disorder prediction 268 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01531 Car-Chr14:12596085 Car05g00430 Car-Chr5:2466510 2.53E-08 transposed
Car12g00132 Car-Chr12:754737 Car05g00430 Car-Chr5:2466510 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00430 K03262 - csv:101210873 721.079