Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g00448 | ATGGAGACGGAGAGGGAGAAGCTTGTTTACTTGGCCAGACTTGCGGAACAAGCAGAGAGATATGATGAAATGGTGGAAATGATGAAGAGCGTCGCGAAGTTGGACGTAGAACTTACTGTGGAGGAGAGAAACCTGGTCTCTGTGGGATATAAGAACGTTATTGGGGCAAGAAGAGCCTCATGGCGTATTCTTTCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAATGAGGCTAATGTGAAGAGGGTCAAGGAGTACAGGCAGAGGGTTGAAGATGAACTGGCGAGAATTTGCCAGGACATCTTATCAGTTGTTGACAAGCATCTCATTCCATCTTCATCCTCTGGCGAATCCAATGTTTTTTACTATAAGATGAAAGGGGATTATAATCGATACTTAGCGGAGTTTAAATCTGGCCAAGAACGCGAAGAAGCTGCAGACCAGTCGATGAAGGCTTATGAGTCTGCCTCAAGCATTGCAAGCTCTGATCTTCCTCCAACACATCCAATCAGACTTGGCTTGGCGCTTAACTATTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCATGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAACTCGATGGCCTCAATGAAGAATCCTACAAGGATAGTACCCTCATCATGCAATTGCTGAGGGATAATCTCACGTTATGGACCTCAGATCTCCCAGAAGAGGGAGGCGAGCAATCTAAAGCTGCTGATGAACCTTGA | 753 | 44.89 | METEREKLVYLARLAEQAERYDEMVEMMKSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEANVKRVKEYRQRVEDELARICQDILSVVDKHLIPSSSSGESNVFYYKMKGDYNRYLAEFKSGQEREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNYSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKAADEP | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2561609 | 2564746 | - | Carg08189-RA | Car05g00448 | 148834 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g00448 | 250 | PANTHER | 14-3-3 PROTEIN | 2 | 247 | IPR000308 | - | |
Car05g00448 | 250 | Pfam | 14-3-3 protein | 11 | 233 | IPR023410 | - | |
Car05g00448 | 250 | PANTHER | 14-3-3-LIKE PROTEIN GF14 OMICRON | 2 | 247 | - | - | |
Car05g00448 | 250 | SUPERFAMILY | 14-3-3 protein | 4 | 235 | IPR036815 | - | |
Car05g00448 | 250 | Gene3D | - | 1 | 246 | IPR036815 | - | |
Car05g00448 | 250 | SMART | 1433_4 | 5 | 246 | IPR023410 | - | |
Car05g00448 | 250 | ProSitePatterns | 14-3-3 proteins signature 1. | 43 | 53 | IPR023409 | - | |
Car05g00448 | 250 | PIRSF | 14-3-3 | 1 | 246 | IPR000308 | - | |
Car05g00448 | 250 | PRINTS | 14-3-3 protein zeta signature | 37 | 66 | IPR000308 | - | |
Car05g00448 | 250 | PRINTS | 14-3-3 protein zeta signature | 86 | 110 | IPR000308 | - | |
Car05g00448 | 250 | PRINTS | 14-3-3 protein zeta signature | 117 | 139 | IPR000308 | - | |
Car05g00448 | 250 | PRINTS | 14-3-3 protein zeta signature | 152 | 178 | IPR000308 | - | |
Car05g00448 | 250 | PRINTS | 14-3-3 protein zeta signature | 179 | 205 | IPR000308 | - | |
Car05g00448 | 250 | PRINTS | 14-3-3 protein zeta signature | 206 | 235 | IPR000308 | - | |
Car05g00448 | 250 | ProSitePatterns | 14-3-3 proteins signature 2. | 215 | 234 | IPR023409 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car01g01226 | Car05g00448 | CCT | |
Car01g01226 | Car05g00448 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car05g00448 | Car-Chr5:2561609 | Car11g01576 | Car-Chr11:12512982 | 5.97E-150 | dispersed | |
Car05g00448 | Car-Chr5:2561609 | Car05g00457 | Car-Chr5:2622520 | 3.15E-122 | proximal | |
Car01g01226 | Car-Chr1:11259232 | Car05g00448 | Car-Chr5:2561609 | 5.09E-141 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g00448 | K06630 | - | csv:101222677 | 472.626 |