Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00448 ATGGAGACGGAGAGGGAGAAGCTTGTTTACTTGGCCAGACTTGCGGAACAAGCAGAGAGATATGATGAAATGGTGGAAATGATGAAGAGCGTCGCGAAGTTGGACGTAGAACTTACTGTGGAGGAGAGAAACCTGGTCTCTGTGGGATATAAGAACGTTATTGGGGCAAGAAGAGCCTCATGGCGTATTCTTTCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAATGAGGCTAATGTGAAGAGGGTCAAGGAGTACAGGCAGAGGGTTGAAGATGAACTGGCGAGAATTTGCCAGGACATCTTATCAGTTGTTGACAAGCATCTCATTCCATCTTCATCCTCTGGCGAATCCAATGTTTTTTACTATAAGATGAAAGGGGATTATAATCGATACTTAGCGGAGTTTAAATCTGGCCAAGAACGCGAAGAAGCTGCAGACCAGTCGATGAAGGCTTATGAGTCTGCCTCAAGCATTGCAAGCTCTGATCTTCCTCCAACACATCCAATCAGACTTGGCTTGGCGCTTAACTATTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCATGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAACTCGATGGCCTCAATGAAGAATCCTACAAGGATAGTACCCTCATCATGCAATTGCTGAGGGATAATCTCACGTTATGGACCTCAGATCTCCCAGAAGAGGGAGGCGAGCAATCTAAAGCTGCTGATGAACCTTGA 753 44.89 METEREKLVYLARLAEQAERYDEMVEMMKSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEANVKRVKEYRQRVEDELARICQDILSVVDKHLIPSSSSGESNVFYYKMKGDYNRYLAEFKSGQEREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNYSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKAADEP 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2561609 2564746 - Carg08189-RA Car05g00448 148834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00448 250 PANTHER 14-3-3 PROTEIN 2 247 IPR000308 -
Car05g00448 250 Pfam 14-3-3 protein 11 233 IPR023410 -
Car05g00448 250 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 2 247 - -
Car05g00448 250 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Car05g00448 250 Gene3D - 1 246 IPR036815 -
Car05g00448 250 SMART 1433_4 5 246 IPR023410 -
Car05g00448 250 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Car05g00448 250 PIRSF 14-3-3 1 246 IPR000308 -
Car05g00448 250 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Car05g00448 250 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Car05g00448 250 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Car05g00448 250 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Car05g00448 250 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Car05g00448 250 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Car05g00448 250 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01226 Car05g00448 CCT
Car01g01226 Car05g00448 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00448 Car-Chr5:2561609 Car11g01576 Car-Chr11:12512982 5.97E-150 dispersed
Car05g00448 Car-Chr5:2561609 Car05g00457 Car-Chr5:2622520 3.15E-122 proximal
Car01g01226 Car-Chr1:11259232 Car05g00448 Car-Chr5:2561609 5.09E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00448 K06630 - csv:101222677 472.626