Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00457 ATGGCTGCCACCCCCTCTGTTCGTGAGGAGCATGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCAGCTGCCATCGACAAGGATGAGCTCACCGTCGAGGAGAGAAACCTCCTTTCTGTCGCCTACAAGAACGTTATCGGCGCTCGCAGGGCTTCCTGGCGCATCATTTCCTCCATTGAGCAGAAGGAGGAGAGCCGAGGCAACGCCGACCATGTCTCTGTGATCCGTGATTATAGATCCAAAATTGAGACCGAGCTCTCCAATATTTGCGATGGAATCCTCAAGCTCCTTGATTCCAGACTCATTCCCTCCGCCGTTTCCGGAGATTCCAAGGTTTTCTACCTCAAAATGAAGGGCGACTACCACAGATACCTGGCCGAATTTAAAACCGGAGCCGAACGGAAGGAAGCCGCCGAAAGCACTCTCACTGCTTACAAAGCCGCTCAGGATATCGCGAATGCTGAGTTGCCTCCTACACATCCTATCCGACTTGGATTGACCCTTAACTTCTCTGTATTCTACTACGAAATTTTGAATTCCCCTGATCGTGCCTGCAGTCTTGCAAAACAGGCGTTTGATGAAGCTATCGCTGAGTTGGATACCCTTGGCGAGGAATCCTACAAAGATAGTACTTTAATCATGCAACTTCTTCGCGACAACCTCACTCTCTGGACATCGGACATGCAGGATGATGGTGCGGATGAGATTAAAGAAGCTCCCCCCAAGCGTGAGGATGAAAAGCAGTGA 786 51.02 MAATPSVREEHVYMAKLAEQAERYEEMVEFMEKVSAAIDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNADHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAVSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLTLNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2622520 2624675 + Carg08198-RA Car05g00457 148843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00457 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Car05g00457 261 MobiDBLite consensus disorder prediction 242 261 - -
Car05g00457 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Car05g00457 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Car05g00457 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Car05g00457 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Car05g00457 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Car05g00457 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Car05g00457 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Car05g00457 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Car05g00457 261 Coils Coil 14 34 - -
Car05g00457 261 MobiDBLite consensus disorder prediction 243 261 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00457 Car12g00154 CCT
Car01g01232 Car05g00457 CCT
Car05g00457 Car09g00495 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00457 Car-Chr5:2622520 Car05g00505 Car-Chr5:2929181 7.18E-135 dispersed
Car05g00448 Car-Chr5:2561609 Car05g00457 Car-Chr5:2622520 3.15E-122 proximal
Car01g01232 Car-Chr1:11298726 Car05g00457 Car-Chr5:2622520 1.27E-175 wgd
Car12g00154 Car-Chr12:881107 Car05g00457 Car-Chr5:2622520 0 wgd
Car05g00457 Car-Chr5:2622520 Car09g00495 Car-Chr9:2767971 3.16E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00457 K06630 - csv:101220164 496.123