Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g00491 | ATGGTTCATCATGGTTCTACCCAATTTTCGCATAAATTGGGAATTCAAAGTGTTCATGGATGCAATAAGTTACATATTAGTGTCAAGGGAAAGGCTCGTCTACATCTTGTTACTATCGTTCCAACATCACACAGTCTGAGGCACAAATCTGTTAGTCTTCAGCTCTTAGGCAGTGTAAGTCGCTCAATGTATCCTGTGTCTTCCAGAGCAAATGTTTTTGTGTGTCGATCTGTTCTGGAACCTAGTGGCGGAGCCGGGACTGCTGTTTTAAAATCTGCAGCTGTGGTTTTGACAAGATATTATGATGCGTTACGTGGCAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGTGTCATTGCTTTTGCTGCTTGGGGTGTTGGACCTCTTATGCGTTTGGGGAGGATTCTATTTCTTCATGAGCCAGATGGTAGTTGGAAGAAAAGTAGTACATACTTTGTTACGAGTTCTTACGTTCAACCTTTACTGCTATGGACTGGAGCTACACTGATCTGCAGGGCATTGGATCCAGTAGTCTTACCTTCAGTAGCCAGTCAGGCTGTCAAACAACGACTTCTGAATTTTGTTAGATCTTTGTCTACTGTTATGGCATTTGCCTATTGTATATCAAGTTTGATTCAACAAGTACAAAAGTTTTCTTCTGAATCAAATGACTCGAGTGATACAAGAAATATGGGCTATGATTTTGCTGGTAAAGCTGTTTACACTGCAGTCTGGATTGCTGCTCTTTCATTGTTCATGGAGTTGCTCGGTTTTTCTACCCAGAAGTGGCTGACTGCTGGGGGTCTCGGAACTGTATTGCTTACTCTTGCGGGTCGTGAGATATTTACTAACTTCCTTTCAAGCGTAATGATTCACGCAACGCGACCATTTGTGGTAAATGAATGGATTCAAACAAAGATTAATGGATATGAAGTCTCTGGAACGGTTGAGCATGTTGGTTGGTGGTCACCGACCATTATCCGAGGAGATGATCGTGAAGCAGTTCATATTCCGAATCACAAATTCACTGTTAGTATTGTGAGGAATCTTACCCAGAAGACTCATTGGCGTATCAAGACTCATCTTGCCATCAGCCACTTAGATGTTAATAAGATCAATTATATTGTAGCTGATATGCGCAAAGTTTTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGCAGAATTTTTTTGGATAACATCGATCCTGAAAACCAGGCTCTTATGATTATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAATACCTGTGTGTCAAGTTCAACCTCATTTTCTTAATGTTGATCGTCAAGTTATTCAAGTGTCTGAACTTTCAGCCGCCAATTGATGTGCAGGAGGCAATTCTCTTGGATCTCCTCAGGGTTATCAGCCATCATAGGGCCCGGCTTGCCACTCCCATTCGCACTGTTCAGAAAATATATGGCGAGGTTGACTTGGAGAACGTACCATTTTCCGAGACCATGTATTCACGTACGGGGGCTACTAACCGTCCACTGCTTCTTATTGAGCCATCTTATAAGGTCAATGGTGACGACAAAGCCAGAGTCTCTAGAAGTCCAACTCGCTCGTCAAACGAAGAAAAAGATGCTAAACAAGAGACAGTCTCAACTACAGGGACGAAAGCCCCCGACACTGCTGGTTCAACATCAAGTATTGATATGAAAACAGATGATAGAAAGCCGGTTACTCCATCTGGTACTGCACCTAAGCCGCCTTCAACAGGGTTGTCGGTGTCAAACACTCAGACTCAGGATCTATCAACCAGTACTCCAGAAGAAAGCAGCATGGAAAAGGCAGTAACAAGCAATGAGATAAAAGGAGAAAAGAAAGATGTGATTGGACTGAATTCCAAGCTGCCCAAAAGATCACCCTCAGCTTCCAGTTCCGGCAGCGAGAAAGCTGATAGTCCTCCTCCCTCAAGCTTGCAGAACAAGCAAGACGGCGAGAAGGGCTCTGCATCATCAGTAGTGGGCAGGCCACCATTGGAGGAGAATATCGTCCTTGGAGTTGCCTTGGAAGGGTCCAAAAGAACTCTTCCAATTGATGAAGATTCAGATCCGTCTCCCTTTCACTCTCCTGCTGATTCAAAAGAAATCTCCACACAGAGGAATGGGAGCGAGTTCCCTCCCAGTAGCAAGGATTTGAGAGATGGCCAGTTGCCTGCAGTTCCTGGTGCGACGAAAAATGATTGA | 2226 | 43.76 | MVHHGSTQFSHKLGIQSVHGCNKLHISVKGKARLHLVTIVPTSHSLRHKSVSLQLLGSVSRSMYPVSSRANVFVCRSVLEPSGGAGTAVLKSAAVVLTRYYDALRGSPLLLKLIPAACVIAFAAWGVGPLMRLGRILFLHEPDGSWKKSSTYFVTSSYVQPLLLWTGATLICRALDPVVLPSVASQAVKQRLLNFVRSLSTVMAFAYCISSLIQQVQKFSSESNDSSDTRNMGYDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKINGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNIDPENQALMIMVSCFVKTSRFEEYLCVKFNLIFLMLIVKLFKCLNFQPPIDVQEAILLDLLRVISHHRARLATPIRTVQKIYGEVDLENVPFSETMYSRTGATNRPLLLIEPSYKVNGDDKARVSRSPTRSSNEEKDAKQETVSTTGTKAPDTAGSTSSIDMKTDDRKPVTPSGTAPKPPSTGLSVSNTQTQDLSTSTPEESSMEKAVTSNEIKGEKKDVIGLNSKLPKRSPSASSSGSEKADSPPPSSLQNKQDGEKGSASSVVGRPPLEENIVLGVALEGSKRTLPIDEDSDPSPFHSPADSKEISTQRNGSEFPPSSKDLRDGQLPAVPGATKND | 741 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2839254 | 2843885 | + | Carg08234-RA | Car05g00491 | 148877 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g00491 | 741 | MobiDBLite | consensus disorder prediction | 546 | 563 | - | - | |
Car05g00491 | 741 | MobiDBLite | consensus disorder prediction | 631 | 662 | - | - | |
Car05g00491 | 741 | MobiDBLite | consensus disorder prediction | 688 | 702 | - | - | |
Car05g00491 | 741 | MobiDBLite | consensus disorder prediction | 521 | 545 | - | - | |
Car05g00491 | 741 | MobiDBLite | consensus disorder prediction | 705 | 720 | - | - | |
Car05g00491 | 741 | Pfam | Mechanosensitive ion channel | 239 | 434 | IPR006685 | GO:0016020|GO:0055085 | |
Car05g00491 | 741 | MobiDBLite | consensus disorder prediction | 580 | 612 | - | - | |
Car05g00491 | 741 | MobiDBLite | consensus disorder prediction | 688 | 741 | - | - | |
Car05g00491 | 741 | MobiDBLite | consensus disorder prediction | 521 | 675 | - | - | |
Car05g00491 | 741 | MobiDBLite | consensus disorder prediction | 613 | 627 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car12g00782 | Car-Chr12:7528971 | Car05g00491 | Car-Chr5:2839254 | 9.84E-09 | transposed | |
Car16g00778 | Car-Chr16:4963208 | Car05g00491 | Car-Chr5:2839254 | 0 | transposed | |
Car12g00181 | Car-Chr12:1119626 | Car05g00491 | Car-Chr5:2839254 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g00491 | K22047 | - | csv:101213477 | 1164.83 |