Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00491 ATGGTTCATCATGGTTCTACCCAATTTTCGCATAAATTGGGAATTCAAAGTGTTCATGGATGCAATAAGTTACATATTAGTGTCAAGGGAAAGGCTCGTCTACATCTTGTTACTATCGTTCCAACATCACACAGTCTGAGGCACAAATCTGTTAGTCTTCAGCTCTTAGGCAGTGTAAGTCGCTCAATGTATCCTGTGTCTTCCAGAGCAAATGTTTTTGTGTGTCGATCTGTTCTGGAACCTAGTGGCGGAGCCGGGACTGCTGTTTTAAAATCTGCAGCTGTGGTTTTGACAAGATATTATGATGCGTTACGTGGCAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGTGTCATTGCTTTTGCTGCTTGGGGTGTTGGACCTCTTATGCGTTTGGGGAGGATTCTATTTCTTCATGAGCCAGATGGTAGTTGGAAGAAAAGTAGTACATACTTTGTTACGAGTTCTTACGTTCAACCTTTACTGCTATGGACTGGAGCTACACTGATCTGCAGGGCATTGGATCCAGTAGTCTTACCTTCAGTAGCCAGTCAGGCTGTCAAACAACGACTTCTGAATTTTGTTAGATCTTTGTCTACTGTTATGGCATTTGCCTATTGTATATCAAGTTTGATTCAACAAGTACAAAAGTTTTCTTCTGAATCAAATGACTCGAGTGATACAAGAAATATGGGCTATGATTTTGCTGGTAAAGCTGTTTACACTGCAGTCTGGATTGCTGCTCTTTCATTGTTCATGGAGTTGCTCGGTTTTTCTACCCAGAAGTGGCTGACTGCTGGGGGTCTCGGAACTGTATTGCTTACTCTTGCGGGTCGTGAGATATTTACTAACTTCCTTTCAAGCGTAATGATTCACGCAACGCGACCATTTGTGGTAAATGAATGGATTCAAACAAAGATTAATGGATATGAAGTCTCTGGAACGGTTGAGCATGTTGGTTGGTGGTCACCGACCATTATCCGAGGAGATGATCGTGAAGCAGTTCATATTCCGAATCACAAATTCACTGTTAGTATTGTGAGGAATCTTACCCAGAAGACTCATTGGCGTATCAAGACTCATCTTGCCATCAGCCACTTAGATGTTAATAAGATCAATTATATTGTAGCTGATATGCGCAAAGTTTTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGCAGAATTTTTTTGGATAACATCGATCCTGAAAACCAGGCTCTTATGATTATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAATACCTGTGTGTCAAGTTCAACCTCATTTTCTTAATGTTGATCGTCAAGTTATTCAAGTGTCTGAACTTTCAGCCGCCAATTGATGTGCAGGAGGCAATTCTCTTGGATCTCCTCAGGGTTATCAGCCATCATAGGGCCCGGCTTGCCACTCCCATTCGCACTGTTCAGAAAATATATGGCGAGGTTGACTTGGAGAACGTACCATTTTCCGAGACCATGTATTCACGTACGGGGGCTACTAACCGTCCACTGCTTCTTATTGAGCCATCTTATAAGGTCAATGGTGACGACAAAGCCAGAGTCTCTAGAAGTCCAACTCGCTCGTCAAACGAAGAAAAAGATGCTAAACAAGAGACAGTCTCAACTACAGGGACGAAAGCCCCCGACACTGCTGGTTCAACATCAAGTATTGATATGAAAACAGATGATAGAAAGCCGGTTACTCCATCTGGTACTGCACCTAAGCCGCCTTCAACAGGGTTGTCGGTGTCAAACACTCAGACTCAGGATCTATCAACCAGTACTCCAGAAGAAAGCAGCATGGAAAAGGCAGTAACAAGCAATGAGATAAAAGGAGAAAAGAAAGATGTGATTGGACTGAATTCCAAGCTGCCCAAAAGATCACCCTCAGCTTCCAGTTCCGGCAGCGAGAAAGCTGATAGTCCTCCTCCCTCAAGCTTGCAGAACAAGCAAGACGGCGAGAAGGGCTCTGCATCATCAGTAGTGGGCAGGCCACCATTGGAGGAGAATATCGTCCTTGGAGTTGCCTTGGAAGGGTCCAAAAGAACTCTTCCAATTGATGAAGATTCAGATCCGTCTCCCTTTCACTCTCCTGCTGATTCAAAAGAAATCTCCACACAGAGGAATGGGAGCGAGTTCCCTCCCAGTAGCAAGGATTTGAGAGATGGCCAGTTGCCTGCAGTTCCTGGTGCGACGAAAAATGATTGA 2226 43.76 MVHHGSTQFSHKLGIQSVHGCNKLHISVKGKARLHLVTIVPTSHSLRHKSVSLQLLGSVSRSMYPVSSRANVFVCRSVLEPSGGAGTAVLKSAAVVLTRYYDALRGSPLLLKLIPAACVIAFAAWGVGPLMRLGRILFLHEPDGSWKKSSTYFVTSSYVQPLLLWTGATLICRALDPVVLPSVASQAVKQRLLNFVRSLSTVMAFAYCISSLIQQVQKFSSESNDSSDTRNMGYDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKINGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNIDPENQALMIMVSCFVKTSRFEEYLCVKFNLIFLMLIVKLFKCLNFQPPIDVQEAILLDLLRVISHHRARLATPIRTVQKIYGEVDLENVPFSETMYSRTGATNRPLLLIEPSYKVNGDDKARVSRSPTRSSNEEKDAKQETVSTTGTKAPDTAGSTSSIDMKTDDRKPVTPSGTAPKPPSTGLSVSNTQTQDLSTSTPEESSMEKAVTSNEIKGEKKDVIGLNSKLPKRSPSASSSGSEKADSPPPSSLQNKQDGEKGSASSVVGRPPLEENIVLGVALEGSKRTLPIDEDSDPSPFHSPADSKEISTQRNGSEFPPSSKDLRDGQLPAVPGATKND 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2839254 2843885 + Carg08234-RA Car05g00491 148877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00491 741 MobiDBLite consensus disorder prediction 546 563 - -
Car05g00491 741 MobiDBLite consensus disorder prediction 631 662 - -
Car05g00491 741 MobiDBLite consensus disorder prediction 688 702 - -
Car05g00491 741 MobiDBLite consensus disorder prediction 521 545 - -
Car05g00491 741 MobiDBLite consensus disorder prediction 705 720 - -
Car05g00491 741 Pfam Mechanosensitive ion channel 239 434 IPR006685 GO:0016020|GO:0055085
Car05g00491 741 MobiDBLite consensus disorder prediction 580 612 - -
Car05g00491 741 MobiDBLite consensus disorder prediction 688 741 - -
Car05g00491 741 MobiDBLite consensus disorder prediction 521 675 - -
Car05g00491 741 MobiDBLite consensus disorder prediction 613 627 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00782 Car-Chr12:7528971 Car05g00491 Car-Chr5:2839254 9.84E-09 transposed
Car16g00778 Car-Chr16:4963208 Car05g00491 Car-Chr5:2839254 0 transposed
Car12g00181 Car-Chr12:1119626 Car05g00491 Car-Chr5:2839254 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00491 K22047 - csv:101213477 1164.83