Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g00497 | ATGTTATCCAAATTTCATCTCAGTCGTCACTTTACCCACCCTCCGCCCCATCAACCGGAGGATGAACCTACCGCCGCCGTGCCTTTGCCGTTCAAACCCCTCCCGGAATCAATCTCTGCCGCCGATGATTCCACCATCGAGGTGGTCCGGCGGCCTAGGGGTCGCCCACCGGGCTCCAAAAACAAACCGAAACCGCCTCTCGTCATAACCCGGGAACCCGAACCGACTATGCGGCCGTACGTTCTAGAAGTGCCTGGTGGAAACGACGTCGTTGAAGCTATTTTGCGATTTTGCCGTCAGAAAAATACGGCCCTTTGTGTTCTTAACGGCTCCGGTACCGTTGCTAATGTCTCTCTCCATCAACCCTCCGCTACCCCTAGCGCCACCGTCACATTTCACGGCTGTTTTGAGATCCTCTCCATTTCCGCCACCGTGTTTCCTGAAACGATGTCGTTTCCTGTCCCTAATGGTTTCACCATCTCCCTCGCTGGACATCAGGGTCAAATCGTCGGCGGTATGGTTGCCGGCGCCTTAATCTCTGCCGGTACAGTTTTCGTCATCGCCTCGTCGTTCAACAATCCGATGTACCTCCGGCTTCCCGAACTGGATGAGCTCAAGAATTCGGAATCCGGCGGCGGCGAAGTTCACTCCCCCCATGTCTCCGTCGCCGGAGATAGTAGCGGGCACCGACCCGGGCAGAGTCGAGGGCGCGGGCAGCTTGTTGAATCCCACGGAATGGCTTTAATGAGTTGCCACGCGCCGTCCGACGTAGTATGGGCGCCGACGGCGAGACAACCGCCACCGCCGCCGTACTAA | 816 | 57.48 | MLSKFHLSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLHQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQLVESHGMALMSCHAPSDVVWAPTARQPPPPPY | 271 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2875366 | 2876181 | + | Carg08240-RA | Car05g00497 | 148883 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g00497 | 271 | ProSiteProfiles | PPC domain profile profile. | 74 | 218 | IPR005175 | - | |
| Car05g00497 | 271 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
| Car05g00497 | 271 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 78 | 193 | IPR005175 | - | |
| Car05g00497 | 271 | MobiDBLite | consensus disorder prediction | 207 | 240 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car01g01260 | Car-Chr1:11456219 | Car05g00497 | Car-Chr5:2875366 | 4.91E-86 | dispersed | |
| Car05g00497 | Car-Chr5:2875366 | Car09g00523 | Car-Chr9:2938508 | 3.56E-90 | dispersed | |
| Car12g00177 | Car-Chr12:1096114 | Car05g00497 | Car-Chr5:2875366 | 3.33E-120 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g00497 | - | - | bhj:120075835 | 396.741 |