Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00505 ATGGCCATCGCCGTGCCGGAAAATCTCTCTCGTGAGCAATATGTGTACCTAGCAAAGCTTGCCGAGCAGGCCGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCAGGCTCCGAGCTCTCTGTGGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCCTCCATCGAGCAGAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTATAGATCAAATGTTGAGACTGAGCTTTCCGAGGTCTGTGCGAGTATTTTGAAGCTTTTGGACTCGAATCTTATTCCCTCCGCCACTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAGGGGGATTACCATAGGTATTTGGCTGAGTTTAAGGTTGGGGATGAGAGGAAAACCGCTGCTGAGGATACTATGCTGGCTTATAAGGCTGCTCAGGATGTTGCAGCTGCAAATCTTGCACCCACTCATCCGATTAGGCTGGGGCTGGCACTCAATTTCTCTGTATTTTACTTCGAGATTCTGAATCAGTCCGACAAAGCTTGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAGCTAGATACTTTGGGTGAAGAATCTTACAAGGACAGTACCCTCATCATGCAGCTATTGAGGGACAACCTCACTCTCTGGACTTCAGATGCGCAGGTCAGTAAACACCATCCACCCAGGAAAAAAAAAAGGAAGGAAAGGATGCCGATTCGTTTTGATTCCTCGTTACAGTATCTATTTGTCCCCTCGGTTTCAAAA 840 47.38 MAIAVPENLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSNVETELSEVCASILKLLDSNLIPSATASESKVFYLKMKGDYHRYLAEFKVGDERKTAAEDTMLAYKAAQDVAAANLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQVSKHHPPRKKKRKERMPIRFDSSLQYLFVPSVSK 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2929181 2931513 + Carg08248-RA Car05g00505 148891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00505 280 Coils Coil 17 37 - -
Car05g00505 280 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Car05g00505 280 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Car05g00505 280 Pfam 14-3-3 protein 17 242 IPR023410 -
Car05g00505 280 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Car05g00505 280 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Car05g00505 280 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Car05g00505 280 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Car05g00505 280 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Car05g00505 280 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01232 Car-Chr1:11298726 Car05g00505 Car-Chr5:2929181 8.52E-133 dispersed
Car05g00457 Car-Chr5:2622520 Car05g00505 Car-Chr5:2929181 7.18E-135 dispersed
Car05g00505 Car-Chr5:2929181 Car12g00154 Car-Chr12:881107 6.53E-135 dispersed
Car12g00168 Car-Chr12:1031087 Car05g00505 Car-Chr5:2929181 1.05E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00505 K06630 - csv:101222827 457.603