Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00564 ATGACGGCACCGGTGTTGGTTGATGGGAAGGGGAAGAAGAATATTGAGAATTTGGTGTCTGCTACTAGGTCGTTGAAGGCTAGTTTAGAGAAATCTAGGGCTCTAGGATTTGCGTTGCAGAAAGCTGGGTCGAGATTGGAGGAGATTAGCCAAAGATTGCCGACTTTAGAAGCGGCTGTTCGGCCTATTCGTGCTGATAAGGAAGCTCTCGTCGCCGTCGGTGGCCATATAAACCGTGCTGTTGGCCCTGCGGCGGCGGTGCTTAAGGTTTTTGATGCTGTTCATGGCCTTGAAAAGTCTCTGTTATCGGACCCGCGGAATGATCTCCCTGGTTATTTGTCGGTGTTGAAACGAATGGAGGAGGCATTGAGATTCTTGGGAGATAACTGTGGGCTGGGAATCCAGTGGTTGGAGGACATAGTTGAGTATTTGGAAGATAATACTGTGGCTGATGAGAAATATCTTGGGAGTTTGAAGAAGTCGTTGAAGAAACTGAGGGATTTACAGAGTGATGAGGAGAAAACTGAGCTTGATGGAGGCCTTTTGAATGCTGCTTTAGATAAACTAGAGAACGAGTTTAGGCGTCTGTTAACGGAGCACAGCGTTCCCCTTCCCATGTCTTCTGCAGCGTCTGTCGGTGAGCAAGCTTGCATTGCTCCATCTCCATTGCCTGTGACTGTTATTCACAAACTTCAAGCCATTCTTGGGAGATTGATTGCTAATAAACGACTCGAACGATGCATATCCATTTACGTTGAAGTTCGTAGTTGTAACGTTAGGGCTAGTTTGCAGGCTCTTGGTTTGGATTACTTGGAGATATCGGTTTCCGAGTTCAATGATGTACAGAGCATCGAAGGGTACATTGCGAAATGGGGAACGCATTTGGAGTTTGCAGTGAAACATTTGTTTGAAGCTGAATTCAAGCTTTGTAATGATGTTTTTGAGAGGATAGGATTGGATGTTTGGATGGGCTGTTTTGCAAAGATAGCAACTCAAGCTGGTATTCTTGCATTTCTTCAATTTGGGAAAACTGTTACAGAAAGCAAGAATGATCCTATTAAGCTATTGAAGTTGTTAGATATCTTTGCATCCTTGAACAAACTGAGACTCGACTTTAATAGGCTGTTCGGCGGGGCTGCCTGTTTGGAAATTCAAAACTTGACTCGAGATCTAATTAAGAGGGTTATCGATGGCGTAGCCGAGATTTTCTGGGAACTTCTAGTTCAGGTGGAGCTCCAGAGGCAAAATCCTCCACCTTTAGATGGGGCAGTTCCAAGGTTGGTTAACTTCATTATCGATTACAGTAATAAACTGCTCAGCGATGGTTATCGGCCGATCCTGACCCAGGCCCTCGTCATTCACCGGAGTTGGAAGAAAGAAAAGTTCCAAGAGGCTCTTCTTGTCGGTGAGGTAACGAACCTTGTCAAAGCCATTGAGCAGAATCTGGACACTTGGATAAAGGCTTATGAAGATTCGACCTTGTCGAACTTTTTCGCTATGAACAATCATTGGCATCTATACAAGCACCTCAAAGGAACGAAAGTCGGAGAACTAATGGGAGACAAAGTAAAGGAACATGAACAGTACAAGGATTACTATGCTGCAGTTTTCTTGAGGGATAGCTGGAGTAAACTTCCTAGTCATTTAAGCAGGGAGGGTTTGATTATGTTCTCCGGTGGACGAGCGACTGCTCGCGATCTTGTTAAGAAACGTTTAAAGACATTCAATGAAGCTTTTGAAGACATGTACAAGAAGCAGTCAAACTGGGTTATAACTGACAGAGAATTGAGGGAGAAGACATCCCAACTTATCGTTCAAACCATCGTGCCCGTTTACCGTAGCTACATGCAAAATTATGGCCCTCTGGTCGAGCAAGACGCAAGTTCGAGTAAGTATGCGAAGTACACCGTGCAGAATCTGGAGAAAATGTTGCTGTCCCTCTTTCACCCAAAGCCGCTTCGGTACAGCAGCCTCAAAGTTAGGCAGACTAGTGGGAAATTCAGCAATGGCGCCGCAGATCATCGTCGTTCCAACTCCATGGTTCTGTGA 2049 45.14 MTAPVLVDGKGKKNIENLVSATRSLKASLEKSRALGFALQKAGSRLEEISQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLGIQWLEDIVEYLEDNTVADEKYLGSLKKSLKKLRDLQSDEEKTELDGGLLNAALDKLENEFRRLLTEHSVPLPMSSAASVGEQACIAPSPLPVTVIHKLQAILGRLIANKRLERCISIYVEVRSCNVRASLQALGLDYLEISVSEFNDVQSIEGYIAKWGTHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGVAEIFWELLVQVELQRQNPPPLDGAVPRLVNFIIDYSNKLLSDGYRPILTQALVIHRSWKKEKFQEALLVGEVTNLVKAIEQNLDTWIKAYEDSTLSNFFAMNNHWHLYKHLKGTKVGELMGDKVKEHEQYKDYYAAVFLRDSWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSNWVITDRELREKTSQLIVQTIVPVYRSYMQNYGPLVEQDASSSKYAKYTVQNLEKMLLSLFHPKPLRYSSLKVRQTSGKFSNGAADHRRSNSMVL 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3312570 3314618 + Carg08307-RA Car05g00564 148950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00564 682 Coils Coil 158 178 - -
Car05g00564 682 Pfam Exo70 exocyst complex subunit 290 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00564 Car-Chr5:3312570 Car17g00602 Car-Chr17:5710345 0 dispersed
Car12g00281 Car-Chr12:1853872 Car05g00564 Car-Chr5:3312570 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00564 K07195 - csv:101207478 1243.8