Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00592 ATGGAGAAAGAAAGGGCTCCTTCGTATCCATTGGAAGCTTTGTGGGTTGACAGAGTTGTATCAAAGGGCTGCAGCAACATCAATTTAAGTTATCTATCAAAATTTGTTACTTTTCTCCATCTCTTTGTGGTGTCTGCCAAACTGATGGACGTTCCCTCAGTGGAACTAAATTGTGAAAGTGAAGGAGACTCGTACCCTTTATTAATGGCACAACCAGAAAATTCTAACAGCAGTGAGCATATCATTGACGTAACTGGTACTGGTGATTCTACCCCCTCTAGTTTACCTCATGGTAGGAATTCAAATGGCTTAAATTTATCACAACCTGAAGATAGACCTTCAAGTAGTACACAAGTTCCCTTGTCTCAACCTTCAATTTCTTCTACTGGATCAAATTCTAGGAATTCTTCATTCATAAGAAGAGGAGATGCGCGACGGCGTAGAAGTCCATTGAATTCTGGCTTATGGATATCTATTGAATTACTACTCACTATGAGCCAGATTATTGCAGCTATTATTGTCTTATCATTGTCAAAGAACGAAAAACCTCGTGCACCTTTGTTTGCGTGGATTGTGGGATATGCATCTGGGTGTGGTGCCACCCTTCCTCTCCTCTATTGGCGTTATCGACACCACAATCAAGCTTCAGAACAAGGTTCTCTTCAGTCCAGCCAGAATTCTTCTCGCATTAATGCTCCTGCTGGGCCATTCTCTCTTTCTGTTTCTAGGGCGTCAGAAGGGGAAGAACTTCAGCATCCTGCCCCATCCCCTAGAGGCAGTCAAGGGTCAGGAGTAGTAACAGGAAGATTTAAAGTTTTGGTTGAATATTTGAAGATGGGCCTGGATTGCTTCTTTGCTGTTTGGTTTGTAGTTGGTAACGTTTGGATCTTTGGAGGGCATTCATCAGCCTCCGAGGCTCCTAACTTGTACAGGCTATGTATAGTGTTTCTTACCTTTAGCTGTATTGGTTACGCCATGCCTTTCATTCTATGTGTAACCATCTGCTGTTGCCTACCATGTATAATTTCCATCCTTGGGTTTAGAGAGGAGTTTACACAGACCCGAGGAGCCACAGCAGAATCTATTAATGCTTTACCAGCTTATAAATTTAAGCTGAAGAAAAGCAGAAGCGGAGATGATAGAGAAAACAACTCCGGGGCTGGTGAAGGAGGAGGGGTTGTGGCTGCTGGAACTGAAAAGGAGCGAGTGATCTCTGGAGAAGATGCTGTCTGTTGCATTTGCTTAGCAAAATACGCCAACAATGATGAACTGAGAGAGCTGCCATGTTCTCACTTTTTTCACAAGGACTGTGTAGATAAATGGTTGAAAATCAACGCACTGTGCCCACTGTGCAAAACCGAGGTCGGTGAGAGTATCATCAGCTCTCTTGATGGGGCTAATAGACAACAGGAGCAATTTTCCCCCACGTTTGGATGA 1437 43.49 MEKERAPSYPLEALWVDRVVSKGCSNINLSYLSKFVTFLHLFVVSAKLMDVPSVELNCESEGDSYPLLMAQPENSNSSEHIIDVTGTGDSTPSSLPHGRNSNGLNLSQPEDRPSSSTQVPLSQPSISSTGSNSRNSSFIRRGDARRRRSPLNSGLWISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHHNQASEQGSLQSSQNSSRINAPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGVVTGRFKVLVEYLKMGLDCFFAVWFVVGNVWIFGGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILCVTICCCLPCIISILGFREEFTQTRGATAESINALPAYKFKLKKSRSGDDRENNSGAGEGGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINALCPLCKTEVGESIISSLDGANRQQEQFSPTFG 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3450397 3457360 - Carg08335-RA Car05g00592 148978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00592 478 MobiDBLite consensus disorder prediction 78 144 - -
Car05g00592 478 MobiDBLite consensus disorder prediction 78 138 - -
Car05g00592 478 Pfam Ring finger domain 411 452 IPR001841 -
Car05g00592 478 ProSiteProfiles Zinc finger RING-type profile. 411 452 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00592 Car-Chr5:3450397 Car09g00929 Car-Chr9:5723236 7.90E-08 dispersed
Car12g00287 Car-Chr12:1879624 Car05g00592 Car-Chr5:3450397 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00592 - - csv:101211818 773.852