Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00611 ATGGATTCTCAACTTACCAACGCCCAGGATTTCATCTTCCGATCAAAGCTCCCCGACATCTACATCCCAAACCACCTCCCCCTCCACACCTACTGCTTCGAACACCTCTCCCAATTCCACCACCGCCCCTGCCTAATCAACGCCGCCACCGGCCAAATCCACACCTACGCCGCGGTCGACCTAGCCGCCAGACGCGTTGCCACCGGTCTAAGCAAGATCGGTGTCGGACAAGGCGATGTCATAATGCTTCTACTACAGAACAGCCCTGAATTCGTCTTCGCCTTCCTTGGCGCGTCCTATGCCGGCGCCATTAGCACCACCGCAAACCCATTATACAAGCCGGCGGAGATCAAGAAACAGGCGGCCACGGCGAGGCCGAAGGTTATAATTACGCAAGCGGAATTTGTGGAGAAAGTTCGGGAATTTGCTGTGGAAAATGGGGTGAAAATTATATGTACGGATTCCCCGCCGGTGGGTTGCCTGAGATTCTCCGAGATTTTAGAGGCCGATGAAAATGAAATTCCGGCAGTGAAAATTAACTCCAACGATGTCGTTGCTCTTCCGTTCTCGTCTGGAACCACCGGAGTTCCTAAAGGCGTTATGCTCACACACAAATCTCTCGTTACAAGCATCGCTCAACAGGTGGACGGAGAGAATCCAAATGTGGACTTAAACAGCAACGACGTGCTTATATGTCTTCTTCCATTATTCCATATCTACTCTCTCAATTCCGTTCTCCTCTGCGGACTACGTGTCGGCGCGGCCATTCTCATCCTCCAAAAATACGACATGTCGTCTCTTCTCCGCCTCATTCAGACCCACAAAGCCACTATAGCCCCCTTCGTCCCTCCCATCGTCTTGGACTTCGCCAAAAACCCCGACATCCACCGTTACGACTTGTCGTCCATCAGAATCGTCATGTCGGGTGCTGCCCCCATGGGCAAGGCCCTGGAAGATACCGTCAAGGCCAGACTTCCCAACGCCACGCTTGGACAGGGATATGGGATGACGGAGGCCGGTCCGGTTCTGTCGATGTGTCTGGGTTTCGCAAAGGAGCCGTTCGAGTTTAAATCAGGTGCGTGCGGGACCGTCGTAAGGAACGCTGAGATGAAGATCATACACCCTGAAACTGGTGTATCTTTGCCACGTAATCACCCTGGTTACCTTAATAACAAAGAAGCCACAGAGAAGACTATAGACAAGAATGGGTGGCTCCACACTGGAGACTTGGGGTTCATCGACGACGACGACGAGATCTTCATTGTCGATCGACTGAAGGAACTGATCAAATACAAAGGATATCAAGTGGCCCCAGCTGAGCTTGAAGCTCTCTTGACTTCAAACCCTAATGTTTCTTCTGCTGCTGTCGTACCAATGGAAGATGAAGCAGCTGGAGAGATCCCGGCTGCATTTGTTGTTAGATCTAAAGGCTCCAAGATTAGTGAGGATGATATCAAGAAGTATATTTCTGATCAGAAAGTTTTGTTATCTTCCCAATCGACGTGGGATTTCACAGTATCTGCTAGTTGGGTCACTCATTCTCTTCTCCAATCGGTGTGGGACCCTCCAATCCACCCCTTTTCGGGGTCCAGCATCCTTGCTGGCACACCGCTTCGTGTTCACCCCTTTCAAGGCTTAGCCTCCTTGTTAGCATATTACCCGATGTTTGGTTTTGATATCATTTATAACGAACCAAGCCCACCGGTTATATACTACAAGAAAATCAGGAAGGTTTTCTTTGTGGACTCAATTCCAGTTGCTCCTTCAGGCAAGATCTTGAGGAAAGACCGCCACCAAATCCAGCTCCCTTCGGGGCCCAGCGTCCTTATTGGCACACTATCTTGTGTCTACCCCCCTTCGGGGAACAACGAGAAGGCTGGCACATCATCCGGTGTCTAG 1899 50.76 MDSQLTNAQDFIFRSKLPDIYIPNHLPLHTYCFEHLSQFHHRPCLINAATGQIHTYAAVDLAARRVATGLSKIGVGQGDVIMLLLQNSPEFVFAFLGASYAGAISTTANPLYKPAEIKKQAATARPKVIITQAEFVEKVREFAVENGVKIICTDSPPVGCLRFSEILEADENEIPAVKINSNDVVALPFSSGTTGVPKGVMLTHKSLVTSIAQQVDGENPNVDLNSNDVLICLLPLFHIYSLNSVLLCGLRVGAAILILQKYDMSSLLRLIQTHKATIAPFVPPIVLDFAKNPDIHRYDLSSIRIVMSGAAPMGKALEDTVKARLPNATLGQGYGMTEAGPVLSMCLGFAKEPFEFKSGACGTVVRNAEMKIIHPETGVSLPRNHPGYLNNKEATEKTIDKNGWLHTGDLGFIDDDDEIFIVDRLKELIKYKGYQVAPAELEALLTSNPNVSSAAVVPMEDEAAGEIPAAFVVRSKGSKISEDDIKKYISDQKVLLSSQSTWDFTVSASWVTHSLLQSVWDPPIHPFSGSSILAGTPLRVHPFQGLASLLAYYPMFGFDIIYNEPSPPVIYYKKIRKVFFVDSIPVAPSGKILRKDRHQIQLPSGPSVLIGTLSCVYPPSGNNEKAGTSSGV 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3625899 3630658 + Carg08355-RA Car05g00611 148997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00611 632 Pfam AMP-binding enzyme 35 431 IPR000873 -
Car05g00611 632 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Car05g00611 632 Pfam AMP-binding enzyme C-terminal domain 440 490 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00325 Car-Chr2:2248432 Car05g00611 Car-Chr5:3625899 8.87E-12 dispersed
Car05g00611 Car-Chr5:3625899 Car18g00637 Car-Chr18:7678813 8.70E-104 dispersed
Car10g00380 Car-Chr10:1891976 Car05g00611 Car-Chr5:3625899 2.80E-12 dispersed
Car15g01110 Car-Chr15:8760931 Car05g00611 Car-Chr5:3625899 7.35E-15 dispersed
Car05g00611 Car-Chr5:3625899 Car01g01572 Car-Chr1:13071467 1.66E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00611 K01904 - csv:101210868 838.565