Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00624 ATGGGCTTCTCCTCGCCTCTTAACATACTCGTCGGGATCCCTTCCGACGACGTCGACCAGAGCAAGGAGCTTCTTTCTTGGGCCATCACAGTTCTTGCTCATCAACATGACTGCATTGTTGCTACTCATGTTCTTGTCATTGATGATACGAAGAAGCGTGGATCGACCTCCATGACGATGAAAATTCAATCGCAACTTCGTCGAGCCAAAGCCTACGTCATATCGATTCTCGGAGAGTTCGCTAGCATTAGCCAATCCAAACAGGTTAATTTGGAAGCGCGGGTTGGTTTTAACTCGAGCGTTGGACGAGGTTTGATTGAAGAAATGAACTCGATATCAGCTGACTTTCTTGTTCTTCGTGGTGCGAGAAACAGATCAAACAGCATTACAAGGTACTGTTTTGAGAATGCTCCTGAGAAATGTACTCTGGTGTTCTTGGGAAAGCAAGAACAGCTAAAACAAAATTTGGGCTCTGATTCTCTTCAATCCAAAGGGGAAGTTTTCAGAGCTCAAAAAACAGAGAGAAACAGAGGCGACGATGAGGTGGAAGCCTCCGGCGACTCCATTTCCAACACGACGACGGAGGACGACTCCTCCACGTCCGGAGACAGCAGCACAATTGGGTCTCCACCACCACTAAGTTCCACTTTGAAATCCCAATCCGGCGACCGGCGGCAGCGACTGTCGCCGTGTAAACTGATATCATCGTTCATTGGGTCGCCATTTCGGAAGAGAAATTGTAGCTTTTCTGAGAAGCGATCGGCTCAGCCTTTGTTGAGATGTTTCAGCTATGAAATGATTTTGAATGCTACTAATAACTTCCACCCAGAGAACATGGTGGGGCGAGGTGGGTATTCGGAAGTTTACAAAGGAGAGCTATCTGATGGGAAGATGATTGCGGTGAAGAGACTGACAAAGGACAACAAAGATGGTAACAAAGAGAGAGAGTTTCTTATGGAACTTGGAATAATTGGGCATGTCTTTCATCCAAACACTGCTTCCTTGGTTGGCTGTTGCATTGAAAATGGTCTTTATCTCATCTTCAACTTCTCCCAAAATGGAAACCTTTCTTCTGCGTTACATGGGAAAACAAGCAAAACATTGGAATGGTCAGTGAGATACAAGATTGCTGTGGGAGTTGCAAGGGGTTTGCATTATCTCCATGAATGTTGCAAACATCGCATAATCCACAGAGACATCAAAGCTTCTAATGTCCTTCTTGGCCCTGATTATGAACCTCAGATAACAGACTTTGGGCTAGCAAAATGGCTTCCAAACAAGTGGACACACCATGCAGTGGTACCAATAGAGGGCACATTTGGGTACTTAGCGCCAGAATATTTCATGCATGGCTTTGTGGATGAGAAAACTGACGTTTTTGCCTTTGGAGTTCTTCTTTTGGAGATTGTCACTGGCAGAAGGCCTGTGGACTCATCCAAACAGAGCCTTCTCTTGTGGGCAAAGCCTCTGATGGAGTCGGGCGAGATCGGGCAGCTGGCTGACCCAAGGCTCAAATGCTACGACGCAAAAGAGTTGCAGCGAGTCGTGTTGGCTGCTTCTTGCTGCGTTCGACAGTCGTCGGTCGAGCGCCCATCGATGAGCGAGATATTGGAGGTGCTAACAAAAGGCCATGATTCAGAGATAGCAAAGAGCTTGAGCATGCCAAAGTTGAGCTCTGATGATGATGATAATGAACTGGATGATTATTCCATGATTTTTGGATATGAAATTCCAATAGACACTCTTCTTGAGGATTATTTATGA 1764 45.98 MGFSSPLNILVGIPSDDVDQSKELLSWAITVLAHQHDCIVATHVLVIDDTKKRGSTSMTMKIQSQLRRAKAYVISILGEFASISQSKQVNLEARVGFNSSVGRGLIEEMNSISADFLVLRGARNRSNSITRYCFENAPEKCTLVFLGKQEQLKQNLGSDSLQSKGEVFRAQKTERNRGDDEVEASGDSISNTTTEDDSSTSGDSSTIGSPPPLSSTLKSQSGDRRQRLSPCKLISSFIGSPFRKRNCSFSEKRSAQPLLRCFSYEMILNATNNFHPENMVGRGGYSEVYKGELSDGKMIAVKRLTKDNKDGNKEREFLMELGIIGHVFHPNTASLVGCCIENGLYLIFNFSQNGNLSSALHGKTSKTLEWSVRYKIAVGVARGLHYLHECCKHRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVVPIEGTFGYLAPEYFMHGFVDEKTDVFAFGVLLLEIVTGRRPVDSSKQSLLLWAKPLMESGEIGQLADPRLKCYDAKELQRVVLAASCCVRQSSVERPSMSEILEVLTKGHDSEIAKSLSMPKLSSDDDDNELDDYSMIFGYEIPIDTLLEDYL 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3714222 3717802 - Carg08369-RA Car05g00624 149010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00624 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Car05g00624 587 MobiDBLite consensus disorder prediction 168 184 - -
Car05g00624 587 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Car05g00624 587 Pfam Protein tyrosine and serine/threonine kinase 277 540 IPR001245 GO:0004672|GO:0006468
Car05g00624 587 MobiDBLite consensus disorder prediction 185 226 - -
Car05g00624 587 ProSiteProfiles Protein kinase domain profile. 274 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00624 587 MobiDBLite consensus disorder prediction 163 227 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00624 Car10g00392 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00624 Car-Chr5:3714222 Car08g01067 Car-Chr8:7280231 2.46E-114 dispersed
Car05g00624 Car-Chr5:3714222 Car11g00355 Car-Chr11:1950019 1.35E-133 transposed
Car05g00624 Car-Chr5:3714222 Car10g00369 Car-Chr10:1840473 2.41E-133 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88883 PF07714 PK_Tyr_Ser-Thr 2.40E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00624 - - csv:101218728 995.727