Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00633 ATGGCTACTGATTCTTCCTTTGATGGTGCTATTTTCGACTCGCCGAAATGTAGTAAGTTGAGTATGCAAGAGAAGAGAGAACTTGTTTATGAAATTTCGAGGTCACACGGTGCGTGTGAGAAACTGCAGTCATGGAGTCGTCAAGACATTCTACAAGTGCTGTGTGCAGAGATGGGGAAAGAAAGGAAATATACAGGCTTGACGAAGCAGAAAATAATAGAGCATCTTTTGAGACTTGTATCCGAAAACAAGTCATCGGTGCCTGAGGTTTCGAAAAACATTGAGCCACAGTCTCCTGCAAGTGGCCATAAAACTACCAAAAGGCAGAGGAAATCCGATCATCTAGTTCCTACAAGTGACTTTCCGAGCACTAGTTCTCATAATGATTCGGGTCATACCGTGAGCTGCAAGAACTTGGCTTGTCGAGCGACTCTAAATCCAGAAGATACGTTTTGTAGAAGGTGTTCTTGCTGCATCTGTCGTCAGTATGACGATAACAAGGATCCTAGCTTGTGGATAAGTTGCAGTGCAGAGCCTCCGTTTCAAGGTGACTCGTGCAACATGTCGTGTCATCTCGAATGTGCTTTAAAAGATGAAAGATCGGGCATTTTGAAAGCTGGACAAAGCAGGGGAGTTGATGGGAGCTTTTACTGTGTGTCTTGTGGGAAACTAAACGATTTGCTTGGGTGCTGCAGAAAGCAACTAGTTCATGCGAAAGAAACACGAAGGGTCGACATACTGTGTTATCGTGTCTCTTTGAGCCAAAAGCTTCTCCATGGAACTGAAAAGTATAAAGTGCTTTATCAGATTGTTGATGAATCAGTGAAGAAGCTTGAAGCTGAAGTGGGACCAATAGCTGGTGCACCGGTAAAGATGGGTCGAGGTATCGTAAACAGGCTTTTATCCGGACCCGACGTTCAAAAACTCTGTGCTTCTGCTATTGAGTTACTCGATTCGATGCTCTCCAGCAAATCCTTACATATTGTGCCTAATCCTGACATTCAAGATGCAAGTTTTGTTCCGACAAACATGGTTCGATTCGAAGATGTTCGGTCGACATCCCTCACTCTGGTTTTGAGTTGTGAATATGGATCATCCTCTGAGAACCGGGTCGGCTTCACGTTATGGCATCGTAAGGCGGATGATGCAGATTATCCAACAGAACCAACATATATTCTACAACAACCGAAGGCGAGGTGTGTCGTGATGGGACTATCACCTGCTACTGAATATCATTTCAAAATTGTTTTGTTTGAAGGGACAAGGGAGTTGAGGGAGTTTGAAGTTCAATTCTCAACAATTAGGGAGGTAGAAGAGAACCCAGGTTGTTTAGAAATTGAGAGAAGCCAAAGCCATGCAACCAACTGTAGCGACCTTTCGAATCCTTCTTCGGTTGAAGACGAAACTACTGACATTCTTCCCTATAGTGATCGAACCGATAACGCAGGAAAGAACTCGACCGCCCATTCAAAGGGGACGGAAATGCATTCCTCTGCTATTTTATCCACTGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGAACAGCAGCAGGAACAGTACCTGTGCTGGATGAGGCAAATGCTGCTGGAATTGTATGTTTGATTCCAAACTCTGTCGGATCAAAGCTCGAGAACAGGCATGGACCATCTGCGCCGAAACTCAACACCAATAATCAATTAGGCGCTCTGGTTCGGTCTGGAATGGAGCGCCAGCCGTTCGTTGGCTGTTCTGAAGATGGCTTGCCTATTACACCCTGCAAGCTTGAAGTGCTAAAGGACAGTCTTGGTAGGGGTGAGAGACTGGAATCCAACTGCAAGGACGTTGACAACAGGACTCGAAAAGGTGGGGAACCTCAAGACGGTGGCACGTCGAAGATGCGAACTGGGGAAAGACAGGACGATAAATGTACTGAAAATGGTGTTTCGGATCGGGATTTTGAACACTATGTGAAGGTTATTAGATGGTTAGAGTGCGAAGGACATATCGAAAAAAATTTCAGACAGAAGTTTCTTACTTGGTACAGCTTGAGAGCATCCCAACAAGAAGTGAAGATTGTGAAAGTGTTTGTGGATACCTTCATTGAAGATCCAGCATCTCTTGCAGAACAACTTGTAGATACTTTCTCGGAATGCATATCGAGCAAAAAACCGACGACAACACCACCCGGGTTCTGCATGAAGCTGTGGCACTGA 2196 44.9 MATDSSFDGAIFDSPKCSKLSMQEKRELVYEISRSHGACEKLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLVSENKSSVPEVSKNIEPQSPASGHKTTKRQRKSDHLVPTSDFPSTSSHNDSGHTVSCKNLACRATLNPEDTFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECALKDERSGILKAGQSRGVDGSFYCVSCGKLNDLLGCCRKQLVHAKETRRVDILCYRVSLSQKLLHGTEKYKVLYQIVDESVKKLEAEVGPIAGAPVKMGRGIVNRLLSGPDVQKLCASAIELLDSMLSSKSLHIVPNPDIQDASFVPTNMVRFEDVRSTSLTLVLSCEYGSSSENRVGFTLWHRKADDADYPTEPTYILQQPKARCVVMGLSPATEYHFKIVLFEGTRELREFEVQFSTIREVEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYSDRTDNAGKNSTAHSKGTEMHSSAILSTDAFNLSDNGEEGTAAGTVPVLDEANAAGIVCLIPNSVGSKLENRHGPSAPKLNTNNQLGALVRSGMERQPFVGCSEDGLPITPCKLEVLKDSLGRGERLESNCKDVDNRTRKGGEPQDGGTSKMRTGERQDDKCTENGVSDRDFEHYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSECISSKKPTTTPPGFCMKLWH 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3806552 3810266 + Carg08378-RA Car05g00633 149019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00633 731 MobiDBLite consensus disorder prediction 116 133 - -
Car05g00633 731 MobiDBLite consensus disorder prediction 87 133 - -
Car05g00633 731 MobiDBLite consensus disorder prediction 87 103 - -
Car05g00633 731 Pfam PHD - plant homeodomain finger protein 136 255 IPR032881 -
Car05g00633 731 MobiDBLite consensus disorder prediction 454 495 - -
Car05g00633 731 MobiDBLite consensus disorder prediction 603 639 - -
Car05g00633 731 ProSiteProfiles Fibronectin type-III domain profile. 340 440 IPR003961 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00633 Car11g00358 CCT
Car05g00633 Car10g00371 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00633 Car-Chr5:3806552 Car12g00187 Car-Chr12:1155044 1.61E-16 dispersed
Car10g00371 Car-Chr10:1847121 Car05g00633 Car-Chr5:3806552 0 wgd
Car11g00358 Car-Chr11:1959725 Car05g00633 Car-Chr5:3806552 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00633 - - csv:101222501 1290.79