Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00639 ATGGCGGCTTTAACTCTCGAGGAGATCAAGAACGAGACAGTTGATCTGGAGAAAATTCCTATTGAAGAAGTGTTTGAGCAGCTGAAATGTACAAGAGAAGGTTTAACTTCCCAAGAAGGGGAGAATCGTCTTCAAATCTTTGGACCCAACAAGCTAGAAGAGAAAAAGGAAAGCAAGATTCTGAAGTTTCTTGGGTTTATGTGGAATCCCCTGTCTTGGGTCATGGAAGCTGCAGCTGTCATGGCCATTGCCTTGGCCAACGGCGGCGGTAGGGGCCCCGATTGGCAGGACTTCGTCGGTATCGTCTGTTTGTTGGTTATCAACTCCACCATTAGTTTCATTGAAGAGAACAATGCTGGTAATGCTGCAGCTGCTCTCATGGCTGGTCTTGCACCTAAAACTAAGGTTCTAAGGGATGGAAAATGGTGTGAACAAGATGCGTCAATTCTCGTTCCAGGAGACGTGATTAGTGTGAAACTAGGAGACATCATCCCGGCCGATGCTCGTCTTCTCGAGGGTGATCCGTTAAAGGTCGATCAATCTGCATTGACCGGAGAATCACTTCCGGTGACGAAGAATCCAGGGGATGAAGTTTTCTCTGGCTCAACTTGCAAACAAGGAGAGATTGAAGCTGTTGTTATTGCCACTGGTGTCCACACCTTCTTTGGAAAGGCAGCTCATCTTGTTGATAGCACCAACCAAGTTGGGCACTTCCAAAAGGTTCTTACTGCCATTGGGAACTTTTGTATTTGCTCCATTGCCATTGGTATGCTGATCGAGATCATCGTCATGTACCCGATCCAACGCCGTGCCTACCGAGATGGAATCGACAACCTTTTGGTTCTTTTGATTGGAGGCATTCCAATTGCTATGCCTACTGTCTTGTCTGTCACTATGGCTATTGGGTCTCACAAGCTGTCCCAACAGGGTGCTATCACTAAGAGAATGACTGCTATCGAAGAAATGGCCGGTATGGACGTCCTCTGCAGCGACAAAACCGGAACGCTCACTCTTAACAAGTTGAGTGTCGACAAGAACTTGATCGAGGTATTCGTTAAGGGCATTGACAAGGAACATGTCATTCTTCTTGCTGCAAGAGCTTCTAGGACTGAAAACCAGGATGCGATTGATGCTGCCATGGTCGGAATGCTCGCTGACCCGAAAGAGGCAAGAGCTGGAATTAGAGAAATTCACTTCTTCCCATTCAACCCTGTTGATAAGAGAACTGCTTTGACTTACATTGATTCTAATGGAAACTGGCACCGTGCTAGCAAAGGCGCTCCCGAGCAGATCTTGACACTTTGCAACTGTAAAGAGGACTTCAAGAGGAAGGTGTTTTCTGTGATCGACAAGTTCGCCGAGCGCGGGCTTCGGTCTTTGGCTGTTGCTAGACAGGAAGTGCCTGAGAAAAACAAGGAGAGTCCCGGTGCTCCATGGCAATTCGTTGGTCTGTTGCCCCTTTTCGACCCTCCGAGGCACGACAGTGCGGAAACCATCCGCAGAGCTCTCAACTTGGGTGTGAATGTCAAGATGATTACTGGTGATCAACTTGCTATTGCTAAGGAAACTGGCCGACGACTTGGAATGGGAACGAATATGTATCCATCTTCTTCGCTACTCGGCCAACACAAGGACGAAAGCATTGCTGGCCTCCCGGTTGAAGAGTTGATTGAGAAAGCTGATGGATTTGCTGGAGTGTTTCCAGAGCACAAATACGAAATCGTGAAGAAGTTGCAAGAGAGAAAGCACATTTGTGGAATGACAGGAGATGGTGTGAATGATGCTCCTGCTTTAAAGAAGGCAGACATTGGTATAGCTGTTGCTGATGCTACCGATGCAGCACGAGGCGCTTCCGACATCGTTCTTACCGAGCCTGGATTGAGCGTTATCATCAGCGCCGTGTTGACCAGCAGAGCAATCTTTCAGAGGATGAAGAACTATACCATTTATGCAGTTTCGATCACTATTCGTATTGTGTTTGGTTTCATGTTGATTGCTCTCATTTGGAAGTTTGATTTTTCACCGTTCATGGTTTTGATTATTGCTATATTGAATGATGGTACCATTATGACAATTTCAAAGGACAGGGTGAAGCCATCACCATTACCTGACAGTTGGAAACTGAAAGAGATTTTTGCGACCGGGGTAGTACTCGGAGGGTACTTAGCGTTGATGACGGTTATATTCTTTTGGTTAATGGAGGGAACGAACTTCTTTTCGAATACGTTTGGTGTAAAATCGATCCGTCATAGTGAATATGAAATGATGGCTGCTTTGTACCTGCAAGTGAGTATTGTGAGCCAGGCTTTGATTTTTGTGACTCGATCGCGGAGCTGGTCGTACATCGAGAGACCTGGACTTCTATTAGTCGGCGCGTTCTTCATTGCACAGCTGGTTGCAACGGTGATCGCCGTGTACGCGGACTGGCGTTTCGCAAAGATTAAGGGAATTGGATGGGGATGGGCCGGTGTCATCTGGTTGTACAGCATCGTTTTCTATATTCCGCTCGATCTCATGAAGTTTGCTATTCGATATATATTGAGCGGAAAGGCATGGCTCAACTTGTTAGAAAACAAGACCGCTTTCACCACCAAGAAAGACTACGGAAAAGAGGAACGAGAAGCTCAGTGGGCCCTAGCTCAAAGGACATTACACGGACTTCAACCTCCCGAGTCGACAAACATCTTCTCCGAAAAAAGTAGCTACAGAGAACTCTCGGAGATCGCAGAGCAAGCTAAGAGACGTGCCGAGATTGCAAGGCTCCGGGAGCTGAACACACTCAAGGGTCATGTCGAGTCGGTCGTGAAGTTGAAGGGACTCGACATCGACACGATCCAGCAACACTACACAGTGTGA 2856 47.13 MAALTLEEIKNETVDLEKIPIEEVFEQLKCTREGLTSQEGENRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAVMAIALANGGGRGPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEQDASILVPGDVISVKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMLIEIIVMYPIQRRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGIDKEHVILLAARASRTENQDAIDAAMVGMLADPKEARAGIREIHFFPFNPVDKRTALTYIDSNGNWHRASKGAPEQILTLCNCKEDFKRKVFSVIDKFAERGLRSLAVARQEVPEKNKESPGAPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWLMEGTNFFSNTFGVKSIRHSEYEMMAALYLQVSIVSQALIFVTRSRSWSYIERPGLLLVGAFFIAQLVATVIAVYADWRFAKIKGIGWGWAGVIWLYSIVFYIPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPESTNIFSEKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3866859 3872323 + Carg08384-RA Car05g00639 149025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00639 951 Pfam Cation transporter/ATPase, N-terminus 18 81 IPR004014 -
Car05g00639 951 Pfam E1-E2 ATPase 131 308 - -
Car05g00639 951 Pfam haloacid dehalogenase-like hydrolase 325 602 - -
Car05g00639 951 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Car05g00639 951 Coils Coil 902 922 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00639 Car12g00275 CCT
Car01g01188 Car05g00639 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01188 Car-Chr1:11027067 Car05g00639 Car-Chr5:3866859 0 dispersed
Car05g00639 Car-Chr5:3866859 Car12g00275 Car-Chr12:1821076 0 dispersed
Car11g00342 Car-Chr11:1865736 Car05g00639 Car-Chr5:3866859 0 wgd
Car12g00850 Car-Chr12:8294040 Car05g00639 Car-Chr5:3866859 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00639 K01535 - csv:101221564 1788.08