Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00658 ATGGTGGGTGAGGTGGCAATGGAGAAGAACAAGAAAGTAAGGAGAGAGAACAAATTTGAAAGAAGCCATTTTGATGTGTTGGGAATTTGCTGTTCTTCAGAAGTTCCTCTCATTGAAAACATCCTCAAACCCCTCGAAGGAATCAAACAAATCTCTGTTATTGTCCCGACAAGAACTCTCATTGTCGTCCATGATTCCCTCCTCGTTTCTCAGCTTCAAATCGTGAAAGCACTAAACGAAGCAAGATTGGAGGCAAATGTACAATTAAAAGGAAAGGGAATTAGCAAGAAGAAATGGCCAAGTCCTTTTGCAATAGCCAGTGGGTTGCTTCTAACAGCATCCTTTTTGAAGTATGTCTACCACCCATTGCGGTGGCTGGCTGTGGCTGCGGTGGCCGCCGGCATCTTCCCCATTCTCCTAAAAGCCATCTCCGCGGTTCGCCATCTGAGGATCGATGTCAACATTCTTGCCATTATTGCGGTGGTGGGGACAATGAGTATGAATGACTACATGGAAGGTGGGAGCATAGTGTTTTTGTTTTCCATTGCTGAATGGCTTGAGTCAAGAGCAAGCCACAAGGCGAATGCTGCAATGTGGTCGCTGATGAGCCTGGCCCCTCAAAAGGCCACCATAGCTGAAACTGGAGAGGTTGTGGAGGTTAAAGAGGTGAAATTGAAGAGTGTGTTGGCAGTGAAGGGTGGTGAAGTTATTCCCATTGATGGCATTGTTGTGGATGGAAAATGTGATGTTGATGAGAAATCTTTTGACGGAGAGACTTTCCCAGTTCCCAAACTTAAAGATTCTCTTGTTTGGGCTGGTACCATCAACTTAAATGGTTATATTAGTGTTCAAACCACTGTTGTTGCTGAGGACTGCGTGGTGGCAAAGATGGCTGAGTTTGTAGAAGAAGCTCAAAACAACAAATCAAAAACTCAGAGATTCATTGATGAATGTGCCAAATATTACACTCCAGCTGTAGTTGTCATATCAGCTTGTGTAGCAGCCATTCCAGCTGCATTCCGAGTTCACAATCTCAGCCACTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCATGTCCCTGTGCCCTTATCCTCTCCACCCCGGTCGCCGCCTTCTGCGCCCTCACCAAGGCCGCCATGGCCGGTGTTCTCATCAAAGGCAGCGACCACCTTGAAGTTCTTGCAAAGATTAAGGTTGTAGCCTTCGACAAGACAGGCACAATCACTAGAGGTGAATTTGTGGTAACACATTTTCAAGCTCTACGAGATGATATCAGCTTCCACACCTTACTTCATTGGGTTTCAAGCATTGAGAGCAAATCAAGCCATCCAATGGCAGCTGCCCTTGTCAACCATGCAAAGCTGCTTTCTATTGATATTAAACCTGAAAAAGTTGAGGAATTTGAGAACTTTCCAGGAGAAGGTGTTCGTGGGAAGATTGATGGGAAGGATATTTACATTGGAAGTACAAAAATTGCTGCCCGAGCTGGCTGCTCGTCAGCTATGAAGTTAGAGGAGGAAATGAAACAAGGCCAAACCCTTGGATATGTATTTTGTGAGGAGATGGCTGTGGGATCCTTTGGTCTTTCGGATTCTTGTCGGTCAGGAGCTAAAGAAGGCATGGAGGAGCTCAAGAGTCTTGGCATTAAAACAGCTATGCTCACTGGGGACTGTAGTGCAGCTGCCATGCACGCCCAACAACAGCTGGAGAACGCGGTTGATGTAATCCATTCAGAGCTTCTTCCAAAGGAGAAAGCAAATGTGATAAAAGAATTCAAAAGGGATTATGGAGCAACCGCCATGGTTGGCGATGGCTTAAATGATACCCCAGCATTAGCCACAGCTGATATTGGCATATCAATGGGCATTTCTGGTTCACCTCTCGCTACTCAAACTGGAAATGTCATCTTAATGTCAAATGACATCACCAAAATCCCACAAGCCATCAAACTAGCTAGGAAATCTCATGCAAAAGTTGTTCAAAATGTCATTTTGTCAATCGCTACCAAGATTGCAATCCTTGGCTTGGCCATCGCCGGACATCCGCTCGTTTGGGCGGCCGTTCTCGCCGATGTCGGTACCTGCCTATTGGTCATCTTGAACAGCATGCTTCTGTTGAGAGGAAGTGATCATAAACATGGGAACAAATGTTGCAAATCTTCCAAGCTATGCTCGACGAAACATGGACGATGTGATGAAAGTAACACTCGACCGTCTCTCATCATCATCATCACGATCATCGATGCCATGTCGTCGATGATAAATCGCCTAGTCGAGATAATCACAATGGAGATTGTGGGGGTAAATTTCATCACAATCATTCAAATAATGGGAATTGTTCAAAGAAAGTGGGTGAACCCAATTGTAATTGCCACTCACATCATGTAG 2391 45.29 MVGEVAMEKNKKVRRENKFERSHFDVLGICCSSEVPLIENILKPLEGIKQISVIVPTRTLIVVHDSLLVSQLQIVKALNEARLEANVQLKGKGISKKKWPSPFAIASGLLLTASFLKYVYHPLRWLAVAAVAAGIFPILLKAISAVRHLRIDVNILAIIAVVGTMSMNDYMEGGSIVFLFSIAEWLESRASHKANAAMWSLMSLAPQKATIAETGEVVEVKEVKLKSVLAVKGGEVIPIDGIVVDGKCDVDEKSFDGETFPVPKLKDSLVWAGTINLNGYISVQTTVVAEDCVVAKMAEFVEEAQNNKSKTQRFIDECAKYYTPAVVVISACVAAIPAAFRVHNLSHWFHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGSDHLEVLAKIKVVAFDKTGTITRGEFVVTHFQALRDDISFHTLLHWVSSIESKSSHPMAAALVNHAKLLSIDIKPEKVEEFENFPGEGVRGKIDGKDIYIGSTKIAARAGCSSAMKLEEEMKQGQTLGYVFCEEMAVGSFGLSDSCRSGAKEGMEELKSLGIKTAMLTGDCSAAAMHAQQQLENAVDVIHSELLPKEKANVIKEFKRDYGATAMVGDGLNDTPALATADIGISMGISGSPLATQTGNVILMSNDITKIPQAIKLARKSHAKVVQNVILSIATKIAILGLAIAGHPLVWAAVLADVGTCLLVILNSMLLLRGSDHKHGNKCCKSSKLCSTKHGRCDESNTRPSLIIIITIIDAMSSMINRLVEIITMEIVGVNFITIIQIMGIVQRKWVNPIVIATHIM 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4083468 4087283 + Carg23927-RA Car05g00658 149044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00658 796 ProSiteProfiles Heavy-metal-associated domain profile. 21 87 IPR006121 GO:0046872
Car05g00658 796 Pfam haloacid dehalogenase-like hydrolase 398 617 - -
Car05g00658 796 ProSitePatterns E1-E2 ATPases phosphorylation site. 404 410 IPR018303 -
Car05g00658 796 Pfam E1-E2 ATPase 204 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00658 Car-Chr5:4083468 Car07g00031 Car-Chr7:194862 2.10E-74 dispersed
Car05g00658 Car-Chr5:4083468 Car05g00660 Car-Chr5:4109701 0 proximal
Car10g00363 Car-Chr10:1793084 Car05g00658 Car-Chr5:4083468 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00658 K01534 - csv:101203668 1171.38