Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00660 ATGGTGGGTGAGGTGGCAATGGAGAAGAACAAGAAAGTAAGGAGAGAGAACAAATTTGAAAGAAGCCATTTTGATGTGTTGGGAATTTGCTGTTCTTCAGAAGTTCCTCTCATTGAAAACATCCTCAAACCCCTCGAAGGAATCAAACAAATCTCTGTTATTGTCCCGACAAGAACTCTCATTGTCGTCCATGATTCCCTCCTCGTTTCTCAGCTTCAAATCGTGAAAGCACTAAACGAAGCAAGATTGGAGGCAAATGTACAATTAAAAGGAAAGGGAATTAGCAAGAAGAAATGGCCAAGTCCTTTTGCAATAGCCAGTGGGTTGCTTCTAACAGCATCCTTTTTGAAGTATGTCTACCACCCATTGCGGTGGCTGGCTGTGGCTGCGGTGGCCGCCGGCATCTTCCCCATTCTCCTAAAAGCCATCTCCGCGGTTCGCCATCTGAGGATCGATGTCAACATTCTTGCCATTATTGCGGTGGTGGGGACAATGAGTATGAATGACTACATGGAAGGTGGGAGCATAGTGTTTTTGTTTTCCATTGCTGAATGGCTTGAGTCAAGAGCAAGCCACAAGGCGAATGCTGCAATGTGGTCGCTGATGAGCCTGGCCCCTCAAAAGGCCACCATAGCTGAAACTGGAGAGGTTGTGGAGGTTAAAGAGGTGAAATTGAAGAGTGTGTTGGCAGTGAAGGGTGGTGAAGTTATTCCCATTGATGGCATTGTTGTGGATGGAAAATGTGATGTTGATGAGAAATCTTTGACCGGAGAGACTTTCCCAGTTCCCAAACTTAAAGATTCTCTTGTTTGGGCTGGTACCATCAACTTAAATGGTTATATTAGTGTTCAAACCACTGTTGTTGCTGAGGACTGCGTGGTGGCAAAGATGGCTGAGTTTGTAGAAGAAGCTCAAAACAACAAATCAAAAACTCAGAGATTCATTGATGAATGTGCCAAATATTACACTCCAGCTGTAGTTGTCATATCAGCTTGTGTAGCAGCCATTCCAGCTGCATTCAGAGTTCACAATCTCAGCCACTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCATGTCCCTGTGCCCTTATCCTCTCCACCCCGGTCGCCGCCTTCTGCGCCCTCACCAAGGCCGCCATGGCCGGTGTTCTCATCAAAGGCAGCGACCACCTTGAAGTTCTTGCAAAGATTAAGGTTGTAGCCTTCGACAAGACAGGCACAATCACTAGAGGTGAATTTGTGGTAACACATTTTCAAGCTCTACGAGATGATATCAGCTTCCACACCTTACTTCATTGGGTTTCAAGCATTGAGAGCAAATCAAGCCATCCAATGGCAGCTGCCCTTGTCAACCATGCAAAGCTGCTTTCTATTGATATTAAACCTGAAAAAGTTGAGGAATTTGAGAACTTTCCAGGAGAAGGTGTTCGTGGGAAGATTGATGGGAAGGATATTTACATTGGAAGTACAAAAATTGCTGCCCGAGCTGGCTGCTCCTCAGCTATGAAGTTAGAGGAGGAAATGAAACAAGGCCAAACCCTTGGATATGTATTTTGTGAGGAGATGGCTGTGGGATCCTTTGGTCTTTCGGATTCTTGTCGGTCAGGAGCTAAAGAAGGCATGGAGGAGCTCAAGAGTCTTGGCATTAAAACAGCTATGCTCACTGGGGACTGTAGTGCAGCTGCCATGCACGCCCAACAACAGCTGGAGAACGCGGTTGATGTAATCCATTCAGAGCTTCTTCCAAAGGAGAAAGCAAATGTGATAAAAGAATTCAAAAGGGATTATGGAGGAACCGCCATGGTTGGCGATGGCTTAAATGATACCCCAGCATTAGCCACAGCTGATATTGGCATATCAATGGGCATTTCTGGTTCACCTCTCGCTACTCAAACTGGAAATGTCATCTTAATGTCAAATGACATCACCAAAATCCCACAAGCCATCAAACTAGCTAGGAAATCTCATGCAAAAGTTGTTCAAAATGTCATTTTGTCAATCACTACCAAGATTGCAATCCTTGGCTTGGCCATCGCCGGACATCCGCTCGTTTGGGCGGCCGTTCTCGCCGATGTCGGTACCTGCCTATTGGTCATCTTGAACAGCATGCTTCTCTTGAGAGGAAGTGATCATAAACATGGGAACAAATGTTGCAAATCTTCCAAGCTATGCTCGACGAAACATGGACGATGTGATGGCAGTAACACTCGACCGTCTCATCACCATCATCATCACGATCATCATCACCATGGTCATCGATGCCATGTCGTCGATGATAAATCGCCTAGTAGAGATAATCACAATGGAGATTTTGGGGATAAATTTCATCACAATCATTCAAATAATGGGAATTGTTCAAAGAAAGTGGGTGAACCCAATTGTAATTGCCACTCACATCATGTAGCTATCGACATACATGAAGATTAA 2430 45.1 MVGEVAMEKNKKVRRENKFERSHFDVLGICCSSEVPLIENILKPLEGIKQISVIVPTRTLIVVHDSLLVSQLQIVKALNEARLEANVQLKGKGISKKKWPSPFAIASGLLLTASFLKYVYHPLRWLAVAAVAAGIFPILLKAISAVRHLRIDVNILAIIAVVGTMSMNDYMEGGSIVFLFSIAEWLESRASHKANAAMWSLMSLAPQKATIAETGEVVEVKEVKLKSVLAVKGGEVIPIDGIVVDGKCDVDEKSLTGETFPVPKLKDSLVWAGTINLNGYISVQTTVVAEDCVVAKMAEFVEEAQNNKSKTQRFIDECAKYYTPAVVVISACVAAIPAAFRVHNLSHWFHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGSDHLEVLAKIKVVAFDKTGTITRGEFVVTHFQALRDDISFHTLLHWVSSIESKSSHPMAAALVNHAKLLSIDIKPEKVEEFENFPGEGVRGKIDGKDIYIGSTKIAARAGCSSAMKLEEEMKQGQTLGYVFCEEMAVGSFGLSDSCRSGAKEGMEELKSLGIKTAMLTGDCSAAAMHAQQQLENAVDVIHSELLPKEKANVIKEFKRDYGGTAMVGDGLNDTPALATADIGISMGISGSPLATQTGNVILMSNDITKIPQAIKLARKSHAKVVQNVILSITTKIAILGLAIAGHPLVWAAVLADVGTCLLVILNSMLLLRGSDHKHGNKCCKSSKLCSTKHGRCDGSNTRPSHHHHHHDHHHHGHRCHVVDDKSPSRDNHNGDFGDKFHHNHSNNGNCSKKVGEPNCNCHSHHVAIDIHED 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4109701 4113957 - Carg23929-RA Car05g00660 149046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00660 809 ProSiteProfiles Heavy-metal-associated domain profile. 21 87 IPR006121 GO:0046872
Car05g00660 809 MobiDBLite consensus disorder prediction 730 775 - -
Car05g00660 809 Pfam E1-E2 ATPase 204 380 - -
Car05g00660 809 ProSitePatterns E1-E2 ATPases phosphorylation site. 404 410 IPR018303 -
Car05g00660 809 MobiDBLite consensus disorder prediction 753 775 - -
Car05g00660 809 MobiDBLite consensus disorder prediction 738 752 - -
Car05g00660 809 Pfam haloacid dehalogenase-like hydrolase 398 617 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00660 Car10g00363 CCT
Car05g00660 Car09g00315 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00342 Car-Chr2:2437636 Car05g00660 Car-Chr5:4109701 2.19E-40 dispersed
Car05g00660 Car-Chr5:4109701 Car10g00363 Car-Chr10:1793084 0 dispersed
Car05g00658 Car-Chr5:4083468 Car05g00660 Car-Chr5:4109701 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00660 K01534 - csv:101203668 1229.93