Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00664 ATGGTGGTGAATTTCCAGTGCACTGTTCTTGTGTTTTTGGTGCTTGTTGTTGTTGGGAAGGCAGAAATTTACATTGTCACCATTGAAGGAGAACCTATTGTGAGTTACAAAGGTGATCTCGATGGGTTTGAAGCCACAGCAATGGAATCTAATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTCGAAAGTAAACACGACATGCTTCTTGGAATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTACAAGCATCTCATCAATGGATTTGCTGTTGACATCACGCCTGAACAGGCAGAGACTCTAAGACATACACCAATTGTAAAATCTGTTGAGAGGGACTGGAAGGTCAGAAAACTAACAACACACACGCCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGCGGTGGCTTTGACAGAGCTGGAGAGGACATTGTGATTGGATTTGTGGACTCCGGGATTTATCCACATCATCCAAGTTTTGCTACATATAATACCGAACCTTTTGGGCCGTGTTCGAAGTATAAAGGGAAATGTGAAGTAGACCCTCACACTAAGAAGGAATTTTGTAATGGAAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTAATCCAGCTATTCATTTTGAATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCTGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCCCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGGATTTTTGGGGGATTTGTTGCTGATGTAGTTGCAGCTATTGATCAGGCTGTACATGATGGGGTCGATATTCTCAGTCTTTCGGTGGGACCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCAGCTGTGAAGGCTGGGGTATTTGTCGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCGTATAGTCCATGGATAGCAACTGTGGCAGCTGCAATTGACGACAGAAGATACAAAAACCATCTGACGCTTGGTAATGGAAAAATTTTGGCTGGACTTGGTTTATCACCTGCTACACATTTAAATCGGACATACACATTGGTCGCAGCTAATGACGTTCTGTTAGATTCTTCAGTATCGAAGTACAGCCCTTCAGACTGCCAAAGGCCTGACGTTCTAAACAAACGTTTGGTTGAAGGAAAAGTTCTTCTTTGTGGATATTCATTCAGTTTTGTTGTTGGTACCGCTTCAATCAAGAAGGTTTCTCAAACAGCAAGAGCCCTTGGGGCAGCTGGCTTTGTTCTTGCTGTTGAAAACATCTCTCCTGGATCTAAATTTGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTATAACTGATGTCAGCAAGTCGATGGATCTTATAGACTACTACAACACCTCTACGCCCAGAGACTGGACCGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCGAATATTAGAGATTTTAGCTTTCAGGATGCAGACCTTCTCAAACCCGATATTCTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTCTCCAAATGGAACCGACGAGCCGAACTATGTTGGAGAGGGATTCGCTATGATTTCTGGAACCAGCATGGCAGCACCGCATATAGCTGGTATATCAGCTCTTGTAAAACAGAAGCATCCTAACTGGAGTCCTGCAGCCATCAAATCGGCTTTGATGACTACTTCAACAACGATGGACAGAGCAGGAAGACCTCTTAAAGCACAGCAGTTTTCTGAAACAGAAGCCATGAAACTGGTATCTGCAACACCTTTTGATTATGGGAGTGGTCATGTTAACCCAAGAGCTGCACTGGATCCGGGACTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTTTTGTGCACGACGGCGGGTATCAATGTTGACGAGATACACAACCACACAAACTCACCTTGCAACTTCACCATGGGCCATCCCTGGAACCTCAACACCCCATCAATTACCATCGCCCATCTTGTGGGAACTAAGACTGTTACTCGCACAGTAACAAATGTTGCTGAGGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTATTGCCATAGAAACAAGTCCTCCAGCAATGACATTACGATCCGGTTCATCGAGAAAATTCTCAGTAACTCTAACGGCTCGATCACTGACCGGAACCTATAGTTTTGGCGAGGTTCTATTGAAGGGCAGTCGAGGACACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA 2451 44.76 MVVNFQCTVLVFLVLVVVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESNEKIDPTSEIVTSYARHLESKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITPEQAETLRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCSKYKGKCEVDPHTKKEFCNGKIVGAQHFAEAAKAAGAFNPAIHFESPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVSKYSPSDCQRPDVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTARALGAAGFVLAVENISPGSKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGISALVKQKHPNWSPAAIKSALMTTSTTMDRAGRPLKAQQFSETEAMKLVSATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVDEIHNHTNSPCNFTMGHPWNLNTPSITIAHLVGTKTVTRTVTNVAEEETYTITARMDPAIAIETSPPAMTLRSGSSRKFSVTLTARSLTGTYSFGEVLLKGSRGHKVRIPVVAMGYQR 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4131628 4138574 - Carg23933-RA Car05g00664 149050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00664 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 596 606 IPR023828 -
Car05g00664 816 Pfam Fibronectin type-III domain 718 810 IPR041469 -
Car05g00664 816 ProSiteProfiles Serine proteases, subtilase domain profile. 122 673 - -
Car05g00664 816 Pfam Peptidase inhibitor I9 24 126 IPR010259 -
Car05g00664 816 Pfam Subtilase family 153 634 IPR000209 GO:0006508|GO:0008236
Car05g00664 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00664 Car12g00864 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01332 Car-Chr3:10088097 Car05g00664 Car-Chr5:4131628 0 dispersed
Car05g00664 Car-Chr5:4131628 Car07g00037 Car-Chr7:256504 0 dispersed
Car16g00492 Car-Chr16:3151263 Car05g00664 Car-Chr5:4131628 6.97E-08 transposed
Car18g00527 Car-Chr18:4143100 Car05g00664 Car-Chr5:4131628 2.88E-22 transposed
Car12g00864 Car-Chr12:8417233 Car05g00664 Car-Chr5:4131628 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00664 - - csv:101219351 1550.41