Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00682 ATGACTTCCTTCAAGCCCTCTCCCTATGCCAGACGGAGTGATGTGGAGTCCGGCAACTGCAATTCCGACGACCCCGAGGAGGACGACTCATCTAATCCTTTTGAGATTCATACCACTAAGCATGCTTCTGTTGACAGACTCCGCCGCTGGAGACAAGCTGCACTAGTGTTAAATGCTTCTCGTCGATTTCGGTATACCTTAGACTTGAAAAAGGAAGAAGAGAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATATCTCTTTAAAGAGGCTGGGAATCGTCTATCAGGTCCTGGGCCTACAGCATTTGCAGCTCCAAATGGTGATTTTTCTGTTGGGCAAGATCAACTGGCTGTGTTGGTAAAGGACCGAAATGTTGGCACTCTGGAGCAGTATGGAGGGGTTAAAGGGGTAGCAGATATGTTGCAATCTAACTTAGAGAAGGGGATAATTGGTGACGATTCTGATTTACTGAAACGGAGAAACACATATGGTTCAAACACGTATCCTCAGAAACCAGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACGTTGATCATATTGATGATAGCTGCTGTTGCTTCGTTAGTGCTAGGCATAAAGACTGAGGGTATCAAGGAAGGCTGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTTGTAACAGCTATTAGTGACTATCGGCAATCTCTTCAATTTCAGAATTTGAACAAGGAGAAGAGGAACATACAAGTGGAGGTTGTTAGAGGTGGTCGTCGAATTGAGGTCTCAATTTATGACATCGTAGTTGGTGATGTTATACCACTCAATATTGGTGATCAGGTCCCTGCTGATGGCATCTTAATTTCTGGACACTCACTTGCCATTGATGAATCAAGCATGACTGGAGAGAGCAAGATTGTTCAAAAGCATGGTAAGGAACCTTTTCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGCAGCATGCTGGTTACAAGTGTTGGAGTTAATACTGAATGGGGTTTGCTTATGGCAAGTATTTCTGAAGACAATGGCGAGGAAACTCCTTTGCAAGTGCGTTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTCACAGTAGCCCTTGCTGTTTTGATTGTGCTCCTCACAAGGTATTTCACTGGTCACACCAAAAATCCAGATGGAAGTCGTCAGTTTATTGCAGGCCAGACAAAAGTTGGCCGTGCCGTAGATGGAGCCATCAAAATTGTCACTATTGCGGTGACCATTGTTGTGGTTGCTGTGCCCGAAGGGCTTCCACTAGCTGTTACCTTAACTCTTGCTTACTCAATGAGGAAGATGATGGCAGACAAGGCATTGGTGCGGAGGCTATCAGCATGTGAGACGATGGGGTCTGCTACGACTATTTGTAGTGATAAGACTGGAACCTTAACTTTAAATCAGATGACCATTGTTGAGGCTTATGTTGGAGGGAAGAAGATTGATCCGCCAGAGAAGAAGTCAGAGTTGTCTCCCATGATACACTCCATACTTGTTGAAGGCATTGCTCTAAACTCAAATGGTAGTGTATATGTACCTGAGAGTGGTGGAGAGGTAGAGGTTACAGGTTCACCTACAGAAAAGGCTATTCTTAATTGGGGTATCAAGCTAGGAATGAACTTTCAAGCACTTAGATCAGAATCTGCAATTCTTCATGTTTTCCCCTTCAGTTCAGACAAAAAACGTGGTGGTGTTGCAGGTCAACGGGATAATCAAGTTCATATACACTGGAAAGGTGCTGCTGAGATAGTCTTGGCATCATGCACACGGTTTATTGATGAACATGATCACTCTGTCCAACTAGATGAAGATAAGATGAAGTATTTTAAGAGAGCTATTGAGGATATGGCTTCACGTAGTTTACGTTGTGTTGCAATTGCATATAGATCTTTTGAACCTGAGAATGTTCCTGATGGCGAAGAACAATTGAGTAAGTGGGCTCTACCAGAAGATGACCTTGCTTTGTTGGCTATAGTTGGTTTAAAGGACCCCTGTCGACCAGGAGTAAAGGATGCAGTACGACTTTGTCAAAAGGCTGGTGTTAAGGTGCGCATGGTCACTGGTGATAATGTGCAAACTGCTAGAGCTATTGCGTTGGAATGTGGAATACTTGGTTCAGATTCAGATGCTACTGAACCAAATCTTATTGAAGGAAAAGTATTCCGTGCCTTATCTGATGCCCAAAGAGAAGAAGTCGCTGAGAAAATATCAGTGATGGGTCGATCCTCTCCCAATGATAAGCTTCTCCTTGTGCAAGCGTTGAGAAAGAGAGGACACGTAGTTGCTGTAACTGGAGATGGTACAAATGATGCTCCTGCATTACACGAGGCAGATATTGGTCTTGCAATGGGCATTCAGGGGACAGAAGTTGCCAAAGAAAGCTCAGATATTATTATTTTAGATGACAACTTTGCTTCAGTTGTGAAGGTTGTACGGTGGGGCCGATCAGTATATGCAAATATTCAGAAATTCATCCAGTTTCAGCTTACGGTTAATGTTGCAGCACTTATTATCAATGTGGTGGCAGCAATATCCTCCGGTGATGTCCCACTAAATGCTGTGCAGCTTTTGTGGGTTAATCTTATTATGGACACTCTTGGAGCATTAGCGTTGGCAACTGAACCACCAACCAATCACCTCATGGACAGGTCACCAGTTGGTAGAAGAGAACCTCTTATAACAAATATCATGTGGAGGAATCTGCTAATACAGGCATTTTATCAAGTCTCTGTGTTGCTTGTCCTCAATTTTCGTGGTCGGAGTTTGCTTCATTTGAACCACTCCAATATAGAAGCTGTCAAAGTGAAGAATACGTTGATTTTCAATGCATTTGTGCTTTGTCAAATTTTCAACGAGTTTAATGCTCGAAAACCTGATGAGAAGAATATATTCAAAGGAGTCACTAAAAATTACCTCTTTATTGGGATCATTGCAATTACTGTTGTGCTCCAGGTGATAATAATCGAGTTTCTTGGAAAATTCACATCCACTGTCAGGCTAAATTGGAAATATTGGATTATTTCGATAATCATTGGTGTTATCAGTTGGCCTCTAGCTCTCCTTGGAAAATTTATACCTGTTCCTGAAACGCCCTTCCATGTGCTGATTATCAGAATGTTCCGTAAACGACGACCTGGGGGTGGTTAA 3222 42.83 MTSFKPSPYARRSDVESGNCNSDDPEEDDSSNPFEIHTTKHASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALRKIRAHAQAIRAAYLFKEAGNRLSGPGPTAFAAPNGDFSVGQDQLAVLVKDRNVGTLEQYGGVKGVADMLQSNLEKGIIGDDSDLLKRRNTYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNKEKRNIQVEVVRGGRRIEVSIYDIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKHGKEPFLMSGCKVADGSGSMLVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLTVALAVLIVLLTRYFTGHTKNPDGSRQFIAGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTIVEAYVGGKKIDPPEKKSELSPMIHSILVEGIALNSNGSVYVPESGGEVEVTGSPTEKAILNWGIKLGMNFQALRSESAILHVFPFSSDKKRGGVAGQRDNQVHIHWKGAAEIVLASCTRFIDEHDHSVQLDEDKMKYFKRAIEDMASRSLRCVAIAYRSFEPENVPDGEEQLSKWALPEDDLALLAIVGLKDPCRPGVKDAVRLCQKAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKVFRALSDAQREEVAEKISVMGRSSPNDKLLLVQALRKRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRSPVGRREPLITNIMWRNLLIQAFYQVSVLLVLNFRGRSLLHLNHSNIEAVKVKNTLIFNAFVLCQIFNEFNARKPDEKNIFKGVTKNYLFIGIIAITVVLQVIIIEFLGKFTSTVRLNWKYWIISIIIGVISWPLALLGKFIPVPETPFHVLIIRMFRKRRPGGG 1073
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4528221 4547177 + Carg19810-RA Car05g00682 149068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00682 1073 Coils Coil 69 89 - -
Car05g00682 1073 Pfam Cation transporter/ATPase, N-terminus 139 207 IPR004014 -
Car05g00682 1073 Pfam Cation transporting ATPase, C-terminus 874 1050 IPR006068 -
Car05g00682 1073 Pfam Ca2+-ATPase N terminal autoinhibitory domain 32 74 IPR024750 GO:0005516
Car05g00682 1073 ProSitePatterns E1-E2 ATPases phosphorylation site. 484 490 IPR018303 -
Car05g00682 1073 Pfam haloacid dehalogenase-like hydrolase 479 803 - -
Car05g00682 1073 Pfam E1-E2 ATPase 259 460 - -
Car05g00682 1073 MobiDBLite consensus disorder prediction 1 34 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00682 Car12g00873 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01394 Car-Chr1:12157382 Car05g00682 Car-Chr5:4528221 0 dispersed
Car03g00827 Car-Chr3:6730670 Car05g00682 Car-Chr5:4528221 0 dispersed
Car05g00682 Car-Chr5:4528221 Car08g00287 Car-Chr8:1816955 0 dispersed
Car13g00117 Car-Chr13:1022047 Car05g00682 Car-Chr5:4528221 2.80E-110 dispersed
Car08g00730 Car-Chr8:4675471 Car05g00682 Car-Chr5:4528221 0 transposed
Car08g00731 Car-Chr8:4685824 Car05g00682 Car-Chr5:4528221 3.49E-24 transposed
Car19g00672 Car-Chr19:7945807 Car05g00682 Car-Chr5:4528221 5.88E-99 transposed
Car12g00873 Car-Chr12:8608357 Car05g00682 Car-Chr5:4528221 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00682 K01537 - csv:101211703 1912.12