Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00693 ATGTTGGAGGGTGGTCAAAAATTCCCTGGGATGATCGATTTAAATGAGCATGCATATGATCTATCACAAGGGTTTTACCATAAACTTGGTGAGGGAACCAATATGTCTATTGACAGCTTTGCAAGCTTGCAAACGAGCAATGATGGAGGGTCAGTTGCCATGTCTTTAGATAACAGCAGTGTTGGATCGAATGAGTCTCATACTCGGATCTTAAATCACCAAGGGTTGCGGCGGCGTGCAAATGATAACCATACTTTTCAACATAGTGTTAACCATCGTGGAAGAGTTAGACATCACCTGAGTGATGATGCACTAGCCCGAGCCTTATTTGATAGTAATACACCCACCCAGGGTCTTGAAAATTTTGAGAAGTGGACTCTTGATTTAAGGAAACTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTCTACAGAGGTACTTATGATGGCGAAGATGTCGCTATCAAGATCTTGGAGAGGCCAGAGAATGACGTAGAGAAGGCTCAGTTAATGGAACAGCAATATCAGCAGGAGGTGATGATGCTTGCTACTCTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGCCATAAGCCAATGGTTTGGTGCATTGTTACTGAATATGCAAAGGGTGGTTCAGTTAGGCAGTTCTTGATGAAGCGACAAAGTCGCTCTGTCCCATTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCACAGGGACTTGAAATCAGATAACCTTTTGATCTTTGCAGACAAGTCTATCAAAGTTGCTGACTTTGGAGTCGCTCGGATTGAGGTGCAGACAGAGGGCATGACACCTGAGACTGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACCCAAAAGGTGGACTTGTACAGCTTTGGTATCGTTCTGTGGGAGCTCATTACTGGAATGCTTCCATTCCAGAACATGACAGCCGTTCAGGCTGCTTTTGCAGTTGTTAACAAGGGAGTTCGTCCTATCATTCCCAATGATTGCTTACCTGTTTTGAGCGACATCATGACCCGGTGCTGGGATGCCAACCCTGATGTTAGGCCATCATTTTCCGAGGTCGTTCGAATGCTAGAGAATGCACAGACTGAGATCATGACGACTGTCCGTAAAGCTCGTTTCAGGTGTTGCATTATGCAGCCGATGACAACAGACTGA 1242 45.49 MLEGGQKFPGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNHRGRVRHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDVEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFSEVVRMLENAQTEIMTTVRKARFRCCIMQPMTTD 413
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 4686215 4694121 - Carg19822-RA Car05g00693 149079
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car05g00693 413 ProSiteProfiles Protein kinase domain profile. 132 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00693 413 SMART serkin_6 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00693 413 PANTHER SERINE-THREONINE PROTEIN KINASE 2 404 - -
Car05g00693 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672|GO:0006468
Car05g00693 413 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
Car05g00693 413 CDD STKc_MAP3K-like 139 386 - -
Car05g00693 413 SUPERFAMILY Protein kinase-like (PK-like) 117 386 IPR011009 -
Car05g00693 413 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 404 - -
Car05g00693 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Car05g00693 413 Gene3D Transferase(Phosphotransferase) domain 1 215 408 - -
Car05g00693 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672|GO:0006468
Car05g00693 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672|GO:0006468
Car05g00693 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672|GO:0006468
Car05g00693 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Car05g00693 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car05g00693 Car15g00559 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00693 Car-Chr5:4686215 Car18g00156 Car-Chr18:842274 2.03E-100 dispersed
Car13g00524 Car-Chr13:7267270 Car05g00693 Car-Chr5:4686215 5.24E-11 dispersed
Car14g00615 Car-Chr14:3451017 Car05g00693 Car-Chr5:4686215 3.20E-71 dispersed
Car14g01563 Car-Chr14:12783184 Car05g00693 Car-Chr5:4686215 3.40E-35 dispersed
Car03g00955 Car-Chr3:7420282 Car05g00693 Car-Chr5:4686215 1.20E-20 transposed
Car12g00887 Car-Chr12:8769246 Car05g00693 Car-Chr5:4686215 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88885 PF07714 PK_Tyr_Ser-Thr 1.60E-65 CL0016 Car PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00693 - - csv:101213713 825.854