Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g00693 | ATGTTGGAGGGTGGTCAAAAATTCCCTGGGATGATCGATTTAAATGAGCATGCATATGATCTATCACAAGGGTTTTACCATAAACTTGGTGAGGGAACCAATATGTCTATTGACAGCTTTGCAAGCTTGCAAACGAGCAATGATGGAGGGTCAGTTGCCATGTCTTTAGATAACAGCAGTGTTGGATCGAATGAGTCTCATACTCGGATCTTAAATCACCAAGGGTTGCGGCGGCGTGCAAATGATAACCATACTTTTCAACATAGTGTTAACCATCGTGGAAGAGTTAGACATCACCTGAGTGATGATGCACTAGCCCGAGCCTTATTTGATAGTAATACACCCACCCAGGGTCTTGAAAATTTTGAGAAGTGGACTCTTGATTTAAGGAAACTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTCTACAGAGGTACTTATGATGGCGAAGATGTCGCTATCAAGATCTTGGAGAGGCCAGAGAATGACGTAGAGAAGGCTCAGTTAATGGAACAGCAATATCAGCAGGAGGTGATGATGCTTGCTACTCTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGCCATAAGCCAATGGTTTGGTGCATTGTTACTGAATATGCAAAGGGTGGTTCAGTTAGGCAGTTCTTGATGAAGCGACAAAGTCGCTCTGTCCCATTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCACAGGGACTTGAAATCAGATAACCTTTTGATCTTTGCAGACAAGTCTATCAAAGTTGCTGACTTTGGAGTCGCTCGGATTGAGGTGCAGACAGAGGGCATGACACCTGAGACTGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACCCAAAAGGTGGACTTGTACAGCTTTGGTATCGTTCTGTGGGAGCTCATTACTGGAATGCTTCCATTCCAGAACATGACAGCCGTTCAGGCTGCTTTTGCAGTTGTTAACAAGGGAGTTCGTCCTATCATTCCCAATGATTGCTTACCTGTTTTGAGCGACATCATGACCCGGTGCTGGGATGCCAACCCTGATGTTAGGCCATCATTTTCCGAGGTCGTTCGAATGCTAGAGAATGCACAGACTGAGATCATGACGACTGTCCGTAAAGCTCGTTTCAGGTGTTGCATTATGCAGCCGATGACAACAGACTGA | 1242 | 45.49 | MLEGGQKFPGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNHRGRVRHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDVEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFSEVVRMLENAQTEIMTTVRKARFRCCIMQPMTTD | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4686215 | 4694121 | - | Carg19822-RA | Car05g00693 | 149079 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g00693 | 413 | ProSiteProfiles | Protein kinase domain profile. | 132 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car05g00693 | 413 | SMART | serkin_6 | 132 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car05g00693 | 413 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 2 | 404 | - | - | |
Car05g00693 | 413 | Pfam | Protein tyrosine and serine/threonine kinase | 133 | 386 | IPR001245 | GO:0004672|GO:0006468 | |
Car05g00693 | 413 | Gene3D | Phosphorylase Kinase; domain 1 | 121 | 214 | - | - | |
Car05g00693 | 413 | CDD | STKc_MAP3K-like | 139 | 386 | - | - | |
Car05g00693 | 413 | SUPERFAMILY | Protein kinase-like (PK-like) | 117 | 386 | IPR011009 | - | |
Car05g00693 | 413 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE | 2 | 404 | - | - | |
Car05g00693 | 413 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 254 | 266 | IPR008271 | GO:0004672|GO:0006468 | |
Car05g00693 | 413 | Gene3D | Transferase(Phosphotransferase) domain 1 | 215 | 408 | - | - | |
Car05g00693 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 210 | 223 | IPR001245 | GO:0004672|GO:0006468 | |
Car05g00693 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 248 | 266 | IPR001245 | GO:0004672|GO:0006468 | |
Car05g00693 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 294 | 304 | IPR001245 | GO:0004672|GO:0006468 | |
Car05g00693 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 313 | 335 | IPR001245 | GO:0004672|GO:0006468 | |
Car05g00693 | 413 | PRINTS | Tyrosine kinase catalytic domain signature | 357 | 379 | IPR001245 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car05g00693 | Car15g00559 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car05g00693 | Car-Chr5:4686215 | Car18g00156 | Car-Chr18:842274 | 2.03E-100 | dispersed | |
Car13g00524 | Car-Chr13:7267270 | Car05g00693 | Car-Chr5:4686215 | 5.24E-11 | dispersed | |
Car14g00615 | Car-Chr14:3451017 | Car05g00693 | Car-Chr5:4686215 | 3.20E-71 | dispersed | |
Car14g01563 | Car-Chr14:12783184 | Car05g00693 | Car-Chr5:4686215 | 3.40E-35 | dispersed | |
Car03g00955 | Car-Chr3:7420282 | Car05g00693 | Car-Chr5:4686215 | 1.20E-20 | transposed | |
Car12g00887 | Car-Chr12:8769246 | Car05g00693 | Car-Chr5:4686215 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88885 | PF07714 | PK_Tyr_Ser-Thr | 1.60E-65 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g00693 | - | - | csv:101213713 | 825.854 |