Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00751 ATGCTTGGGGACTCCACGACTTCCGTCTTGGGCGGCGGCGCCGGAGAAGACTCTGCCGTACCGGAGACGACAAATCAGCAAGATGGGCTGATGGACGATGTGGGTGAGAGCGGGGCAGTGACGGCGGAGGATAATAATAAGACTTGTGGTGAAGATGAGAGAGGGAGAAGTGGCGAAGGAGACAACGGCGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACTTTGGCGCTGTTGAAAATACGGTCGGAAATGGACGTGGCTTTTCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAGTTTCCAGGAAATTAGGGGAGCTTGGGTATCATCGAAGTGCAAAGAAATGCAAAGAGAAATTTGAGAATGTTTATAAATATCACAAAAGAACCAAAGAAGTCCGATGTGGGAAACCAGATAGTAAAAGTTACAAGTTTTTTGAACAATTAGAAGCTCTTGAAAATCACCCTCCTCTCAATTTCCACTCCCATTTGTCTAAGCCTCCACCTCCGGCAACGGCGGCTTCACCTCCAACCACCGTTATTTCTCACATTCCTTCAACTGTTCCATCGACCACCACCGCCGTACCCCACTTGATGAACATATCATTCACTCAACCAAACCCCACAATTCACCTCCAATCCATGCCCCCTCCGCCTCCCTTGCCATTCAATAACCCTACCAGTTTAGCTACCACCATTGCTCCGCTTTTTCAAACCAATGTCTCATCTGGGGCAGCTGGACTGGGGTTCGAAGCGGATCTCATCTCGAACTCATCGTCTGATGATGTCGACTCGTCGACATCATCCGACGAGGCGTCGAGACAGAGAAAGAAGAGGAAATGGAAGGATTTCTTTGAGAGATTGATGAGGGAAGTGATTGAAAGGCAAGAGGAAATGCAAAAGAGATTCTTGGAAGCAATTGAGAAAAGGGAGCAAGAAAGAGTTGCAAGAGAAGAAGCATGGAGGATGCAAGAAATGGCCAAAATCAATAGAGAAAAAGAGATTTTAGCTCAAGAAAGATCAATGGCAGCTGCTAAAGATGCCGCTATTACATCCTTCCTCCAAAAACTAACACAATCCCACCACAACGACGACAACCCATCACCGCCACCGCCACCACCACGACAACAACCAATCTCAATATCAAATCCGACACCAGTCGTGCAACCGCCGCCGCAACAAGCTTCTACATTGCAAGTTGTTCATCCAAATTCTACCCCACAAAAATTGGTGAACAACAATGAATATTTGCAAATGGAGATTGTGAAAAGAAGTGATAATGGTGGTGAAAGTTATAGGATGAGCCCAGCTTCAAGCTCATCAAGATGGCCAAAAGTGGAAGTGGAAGCACTCATCAAATTGAGAACAAATCTAGACGCCAAATATCAAGAAAATGGACCAAAAGGGCCATTGTGGGAAGAGATATCATCAGCCATGAAGAGACTTGGGTATAATAGAAATGCAAAGAGGTGCAAGGAGAAATGGGAGAACATAAACAAGTACTTCAAGAAAGTAAAGGAGAGTAAAAAAACAAGGCCGGAGGATTCCAAGACTTGCCCTTATTTTCACCAGCTTGATGCTTTGTACAAGGAAAAGAACATCATCAACAACAACAACAATGGCAACAAGTTCGACAACGTCATAATCGGATCATCGACACAGATTATGCCACATCAACAGCAACCATTGATGGTTCGACCAGAGCAACAATGGCCTCCGCAACAAGAACTCGTTCGATCCAACTCAGCCAACAAAGATATGGAGAGCGAACCAATGGATCGAGACGAAAAGGATGAAGATGATGACGAAGATGATGACGAAGAAGAAGACGAGGAAGGTGGAGAGAACTACGAGATTGTGGCAAGCAAGCCAGCTTCGATGAGTGTTGCAGAGTGA 1908 46.17 MLGDSTTSVLGGGAGEDSAVPETTNQQDGLMDDVGESGAVTAEDNNKTCGEDERGRSGEGDNGDRSFGGNRWPRQETLALLKIRSEMDVAFRDASVKGPLWEQVSRKLGELGYHRSAKKCKEKFENVYKYHKRTKEVRCGKPDSKSYKFFEQLEALENHPPLNFHSHLSKPPPPATAASPPTTVISHIPSTVPSTTTAVPHLMNISFTQPNPTIHLQSMPPPPPLPFNNPTSLATTIAPLFQTNVSSGAAGLGFEADLISNSSSDDVDSSTSSDEASRQRKKRKWKDFFERLMREVIERQEEMQKRFLEAIEKREQERVAREEAWRMQEMAKINREKEILAQERSMAAAKDAAITSFLQKLTQSHHNDDNPSPPPPPPRQQPISISNPTPVVQPPPQQASTLQVVHPNSTPQKLVNNNEYLQMEIVKRSDNGGESYRMSPASSSSRWPKVEVEALIKLRTNLDAKYQENGPKGPLWEEISSAMKRLGYNRNAKRCKEKWENINKYFKKVKESKKTRPEDSKTCPYFHQLDALYKEKNIINNNNNGNKFDNVIIGSSTQIMPHQQQPLMVRPEQQWPPQQELVRSNSANKDMESEPMDRDEKDEDDDEDDDEEEDEEGGENYEIVASKPASMSVAE 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5594288 5596926 + Carg26897-RA Car05g00751 149137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00751 635 MobiDBLite consensus disorder prediction 167 192 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 46 61 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 396 418 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 597 619 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 369 395 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 572 635 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 210 231 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 215 229 - -
Car05g00751 635 ProSiteProfiles Myb-like domain profile. 70 128 IPR001005 -
Car05g00751 635 Coils Coil 297 317 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 261 283 - -
Car05g00751 635 ProSiteProfiles Myb-like domain profile. 439 503 IPR001005 -
Car05g00751 635 Pfam Myb/SANT-like DNA-binding domain 445 532 IPR044822 -
Car05g00751 635 Pfam Myb/SANT-like DNA-binding domain 70 156 IPR044822 -
Car05g00751 635 MobiDBLite consensus disorder prediction 1 71 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 363 418 - -
Car05g00751 635 MobiDBLite consensus disorder prediction 572 589 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00435 Car-Chr2:3441499 Car05g00751 Car-Chr5:5594288 3.06E-21 dispersed
Car05g00751 Car-Chr5:5594288 Car20g00935 Car-Chr20:10205691 1.85E-19 dispersed
Car05g00751 Car-Chr5:5594288 Car09g00975 Car-Chr9:6170131 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3575 PF13837 Myb_DNA-bind_4 1.30E-21 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00751 - - cpep:111787713 872.078