Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00767 GTGTCCCGAATCGGGTGGGACAGAAGAGGGTTCCTGACGGATCGGTACACAGAAAGTGGTGGGCGTTGGGAGGTCAATTGGGGGGTTGGTCTGGAGTGCATTCTAAGCATTGTTAGGGCACTTCGGATGGGGTCCTGCTTGTCTGCGGAAAGCAGGAGCCCCATTCCTGGTTCCCCAAACACTCCGGCTAAGCACCGTCGGAGCAAGAACAGTTCTAAGAGGCGAAATGTTTCTCGAAATTCCTCCTTTGGGGATTCGTCACTTCATCGGATCCCCGGCAGGCTGTTCGGCAATGGTGCCACTGATGTGGCTTCTCTGTTCACGCAGCAGGGAAAGAAAGGGACCAATCAAGATGCCATGATTGTCTGGGAGAATTTTGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTTGATGGCCATGGTCCCTATGGTCATATGGTTGCGAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTGAGTGCACATTGGGAGGTCAACTTGACCACAGATGATGTTCATAGAGAGATCAGCCTTAATGCATCAAGTGTAAACTCAGACGAAACAACCTCCTTTTTGTCTGCTAATGAGGAGTTCAAGGCCTCCACCGATCTCGATGGAACGGAAAAGCAACCTGAAATTTTCCATACTTTGAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACTGGGAGCTCAGAATGCACCAAACCATAGATTGCATCTGTAGTGGCACTACAGCAGTGACTTTCGTTAAACAGGGTGAGGATCTTGTCATTGGAAATGTTGGGGACTCCCGAGCCGTTTTGGGTATGAGAGATAAAGATGACTCTCTTGTTGCTATTCAATTGACTGTGGATCTTAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAAGTGTAAAGGTCGTATCTTTGCTCTCCAAGACGAACCTGATGTTGCTCGAGTCTGGCTTCCAGACAGCAACTCTCCTGGACTTGCCATGGCGCGGGCGTTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCTGAAATATCATATCGACGACTCACGGAAAAAGACGAATTCATTGTTCTGGCTTCAGATGGAATATGGGATGTTCTGTCAAACAAAGAGGTCGTAGATATTGTTGCATCAGCTCGAAAACGTACTACTGCAGCTCGAACTCTGGTGGAGACTGCCATTAAAGCATGGAAACATAAATACCCAACTTCTAAGATGGATGACTGTGCGGTCATTTGCCTCTTCCTTGACTCAAACTCCAGCAATCCATCATCTGCTTCCAATAACAAACTGGATGAGCAACAAAGCTTAGTAGATCAAGTCAGTACAGCAGTTGTGGTTGAAAATCTCTGTGGCCCAAATGGTCTGAATCGTTCAGGAACCATCAAAACGAGCAAGAACATTTTGCAGGATGGAAGCGAAGAAGAAGAAGATGAATGGAAGGAGGAAGAACAGTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGGGTCTCGCGCGTAAACACTCTGGTAAACCTGCCGAGATTCGATCCTGGAAAAGAAGGTAAGGCCAGCCGGAAGTGA 1584 47.35 VSRIGWDRRGFLTDRYTESGGRWEVNWGVGLECILSIVRALRMGSCLSAESRSPIPGSPNTPAKHRRSKNSSKRRNVSRNSSFGDSSLHRIPGRLFGNGATDVASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVHREISLNASSVNSDETTSFLSANEEFKASTDLDGTEKQPEIFHTLKESFLKAFRVMDWELRMHQTIDCICSGTTAVTFVKQGEDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLKPNLPAEAERIRKCKGRIFALQDEPDVARVWLPDSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLASDGIWDVLSNKEVVDIVASARKRTTAARTLVETAIKAWKHKYPTSKMDDCAVICLFLDSNSSNPSSASNNKLDEQQSLVDQVSTAVVVENLCGPNGLNRSGTIKTSKNILQDGSEEEEDEWKEEEQSEMGIEWSALEGVSRVNTLVNLPRFDPGKEGKASRK 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5959827 5963157 + Carg25821-RA Car05g00767 149153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00767 527 ProSiteProfiles PPM-type phosphatase domain profile. 103 422 IPR001932 -
Car05g00767 527 MobiDBLite consensus disorder prediction 49 90 - -
Car05g00767 527 Pfam Protein phosphatase 2C 177 401 IPR001932 -
Car05g00767 527 MobiDBLite consensus disorder prediction 468 492 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00767 Car-Chr5:5959827 Car08g00065 Car-Chr8:384030 1.18E-165 dispersed
Car01g01358 Car-Chr1:12004334 Car05g00767 Car-Chr5:5959827 3.06E-93 transposed
Car11g00833 Car-Chr11:4987580 Car05g00767 Car-Chr5:5959827 5.27E-164 transposed
Car16g00965 Car-Chr16:8036771 Car05g00767 Car-Chr5:5959827 4.71E-164 transposed
Car01g00441 Car-Chr1:2524632 Car05g00767 Car-Chr5:5959827 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00767 - - csv:101222150 808.135