Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00778 ATGGAGCATGGAGATATTGTGAGCAAGGGCAAGGGCAAGGGCAAGGGCGTGGTCTCCCATCCTTCAAGTTCCTACAAACAAATCATAATAGTTGCGGCAATTGCAGCCGGACTCCAATTTGGTTGGGCTCTCCAGCTTTCGTTGCTCACACCTTACGTGCAACAACTGGGAGTTCCACGCACATGGTCATCTTTCATATGGCTTTGCGGCCCAATGTCAGGCCTCATTGTGCAGCCCACTGTGGGGTACTACAGCGATCGTTGCACCTCTAGGTTTGGGCGTCGTCGGCCCTTCATTGTTGCTGGGGCTGTCTTTGTGGCGGTTGCCGTTTTCCTCATAGGCTTCGCTGCAGACATTGGGCATTCCGCGGGGGACGAGCTTGCCAAACGCACAAAGCCAAGGGCTGTGGCCATATTCGTGGTTGGATTCTGGGTTCTCGATGTGGCTAACAACATGCTGCAAGGCCCTTGTAGGGCCCTGTTGGCAGACATGTCTTGTAACAACCACAAAAAGATGAGAGTTGCCAATGGGCTGTTCTCCTTCTTCTTGGGCGTAGGGAATGTGTTGGGGTACGCAGCTGGGGCCAATAGCCAACTCCATACACTCCTTCCATTCACAATCACCGAAGCATGCGACGTTTATTGCGCCAACCTCAAAACCTGCTTCCTGATAGACATCGTGTTTCTCCTCACGGTTACCACGTTCGCGATGTTGATGGTGGGTGAGAAGCCGTGGGAGCCCATACACATGGACGGAGAATCAACGCCCTTCTTTGTGCAGTTGATTGGTGCGCTGAAGCAGTTGTCGAGGCCCATGTGGATCCTGATGCTGGTGACAGCCTTGAACTGGGTGGGTTGGTTCCCATTTATAATGTACGACACGGACTGGATGGGTGCGGAAGTGTACGGAGGAAAGCCGAAAGGGAGTCCGGAAGAAGCCAAGTTGTATGAGATGGGTGTTCGAGCAGGGGCGCTGGGGCTGATGATAAACTCCTTCGTGCTCGGGTTTTCCTCTTTGGGGATAGAGCCAGTGAGCCGTATTGTAGGAGGGCTCAGGTGGGTGTGGGGAATTGTGAACATTATATTTACGGTTTGTATGGGAGGCATGGTGGTGGTTACAACGGTGGCAGAGCGTTGGAGGTCGGTTCATGGGTTGGCCCATCCGCCGCCCAACGTCAGGGCTGGAGCCTTTTCAATCTTTGCAGTGTTGGGCATTCCACTTTCGGTCACTTTCAGCGTTCCCTTTGCGCTGGCATCTATCTTTTCTTCAAATTCCAAGGCGGGGCAAGGGCTGTCCTTGGGAATCCTGAACCTGTTCATAGTGATCCCACAGCTTTTAGTGTCGGCAGTGAGTGGGCCCTTAGACGCAGCCTTCGGGGGAGGGAACTTACCGGCGTTCGTGATGGGTGGAATTGCGGCCTTTGCAAGCGCCATGTGTGCCGTCTTCCTGCTCCCCGACCCACCACCTCAGTCTGATGTGTCCTTAACAATGGGCGGTGGCCATTGA 1506 54.05 MEHGDIVSKGKGKGKGVVSHPSSSYKQIIIVAAIAAGLQFGWALQLSLLTPYVQQLGVPRTWSSFIWLCGPMSGLIVQPTVGYYSDRCTSRFGRRRPFIVAGAVFVAVAVFLIGFAADIGHSAGDELAKRTKPRAVAIFVVGFWVLDVANNMLQGPCRALLADMSCNNHKKMRVANGLFSFFLGVGNVLGYAAGANSQLHTLLPFTITEACDVYCANLKTCFLIDIVFLLTVTTFAMLMVGEKPWEPIHMDGESTPFFVQLIGALKQLSRPMWILMLVTALNWVGWFPFIMYDTDWMGAEVYGGKPKGSPEEAKLYEMGVRAGALGLMINSFVLGFSSLGIEPVSRIVGGLRWVWGIVNIIFTVCMGGMVVVTTVAERWRSVHGLAHPPPNVRAGAFSIFAVLGIPLSVTFSVPFALASIFSSNSKAGQGLSLGILNLFIVIPQLLVSAVSGPLDAAFGGGNLPAFVMGGIAAFASAMCAVFLLPDPPPQSDVSLTMGGGH 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6094136 6095740 - Carg27211-RA Car05g00778 149164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00778 501 MobiDBLite consensus disorder prediction 1 20 - -
Car05g00778 501 Pfam MFS/sugar transport protein 40 285 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00514 Car-Chr5:2996463 Car05g00778 Car-Chr5:6094136 5.32E-12 dispersed
Car05g00778 Car-Chr5:6094136 Car12g00209 Car-Chr12:1317264 8.18E-159 dispersed
Car05g00778 Car-Chr5:6094136 Car01g00429 Car-Chr1:2464185 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00778 K15378 - csv:116401998 827.78