Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g00844 | ATGTCGGGATCTGAAGGTGGTGTGATGACCAGTAGAGAATCCTTCAATGTCGCCGTTCAAAATAATTCGTTACAGTCGCAGCCGGCGGCCCAAAATATGCGATTATCCTTCAGTGCCGATGGCACAGCCGTCTACAAACCTGTGACTGTGACTCCGACTCCGACACCTTCAACTTTACCGTCCTACCAATCCTCCATGGCCGGAGTTTCTGGTAATGCCGGTAAGGAGGGATCGGCTGGTGGTGGGTCGATACTGCCCCATGATTTGAATATAAACTCGGTGGGCAGTGAGCAAATAAAGAGGAAGAGGGGAAGGCCAAGGAAGTATGGACCAGATGGCTCCATGGCATTAGCTTTGGGTTCTGGGCAGCCATCAAGAAGTGGAGCTTCTGAAGGAGGATTGGGCTCACCAAATTCATTGAAAAAAAGTAAAGGCAGGCCATCTGGTTCTAAGAAAAAGCGACAATTGGAAGCTTTGGGACCGGCTGGTTTTGGATTCACTCCACATGTTATCGATGTGAAAGCTGGAGAGGATATTTCGTCAAAAATAATGTCCTTTTCTCAGAATGGCCCCAGGGCTATTTGTATCCTTTCAGCAAATGGAGCAATATCAAATGTGACTTTACGTCAACCTGCTACATCTGGTGGAACTGTCACTTATGAGGGGCGGTTTGAAATTTTGTCACTTTCAGGTTCATTTCTCCTCTCCGACAATGGTGGTCAGAGAAGCAGAGCTGGTGGTTTGAGTGTGTCTTTGTCCGGTCCAGATGGCCGAGTTTTAGGTGGCGGCGTCGCGGGTCTTCTTACAGCTTCATCTCCTGTTCAGGTGGTAGTGGGAAGTTTCATAGTCGACAGCAACAAGGAACCAAAGCCAGCCCGCCAAACTGAACCCACAACAGCCTCGCCAATGCTAAACCAAGTCGCCTTTGGTCACTTGACCGGAGGAGCCAGTAGTCCATCGCACGGGACGCTGAGCGAGTCTTCCGGTGGCGGACCTGGCAGCCCCCTCAACAACAGCTCAGGAGCCTGCAACAACAGCAGCATCCATCCACAGACAATGTCCGGCATGCCATGGAAGTAA | 1080 | 50.56 | MSGSEGGVMTSRESFNVAVQNNSLQSQPAAQNMRLSFSADGTAVYKPVTVTPTPTPSTLPSYQSSMAGVSGNAGKEGSAGGGSILPHDLNINSVGSEQIKRKRGRPRKYGPDGSMALALGSGQPSRSGASEGGLGSPNSLKKSKGRPSGSKKKRQLEALGPAGFGFTPHVIDVKAGEDISSKIMSFSQNGPRAICILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSDNGGQRSRAGGLSVSLSGPDGRVLGGGVAGLLTASSPVQVVVGSFIVDSNKEPKPARQTEPTTASPMLNQVAFGHLTGGASSPSHGTLSESSGGGPGSPLNNSSGACNNSSIHPQTMSGMPWK | 359 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 8331160 | 8335085 | + | Carg21895-RA | Car05g00844 | 149230 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g00844 | 359 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 168 | 281 | IPR005175 | - | |
| Car05g00844 | 359 | MobiDBLite | consensus disorder prediction | 310 | 353 | - | - | |
| Car05g00844 | 359 | MobiDBLite | consensus disorder prediction | 48 | 71 | - | - | |
| Car05g00844 | 359 | MobiDBLite | consensus disorder prediction | 310 | 359 | - | - | |
| Car05g00844 | 359 | MobiDBLite | consensus disorder prediction | 48 | 153 | - | - | |
| Car05g00844 | 359 | ProSiteProfiles | PPC domain profile profile. | 162 | 302 | IPR005175 | - | |
| Car05g00844 | 359 | MobiDBLite | consensus disorder prediction | 120 | 144 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car01g01608 | Car05g00844 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car02g01368 | Car-Chr2:9054123 | Car05g00844 | Car-Chr5:8331160 | 7.94E-52 | dispersed | |
| Car05g00844 | Car-Chr5:8331160 | Car08g00794 | Car-Chr8:5327427 | 3.62E-68 | dispersed | |
| Car06g00584 | Car-Chr6:3348786 | Car05g00844 | Car-Chr5:8331160 | 4.15E-51 | dispersed | |
| Car09g00022 | Car-Chr9:126484 | Car05g00844 | Car-Chr5:8331160 | 3.39E-36 | dispersed | |
| Car12g01115 | Car-Chr12:10876119 | Car05g00844 | Car-Chr5:8331160 | 2.22E-32 | dispersed | |
| Car01g01608 | Car-Chr1:13213409 | Car05g00844 | Car-Chr5:8331160 | 3.41E-107 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g00844 | - | - | csv:101211767 | 500.745 |