Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00852 ATGGGCGGCGGTGGCGGTGGCGGTGCTCAAAGTAGAGAGTTAGATCAAACTCCGACATGGGCCGTTGCCGCTGTTTGTGCAGTCATCATTCTCATTTCCATCATATTGGAAAAAGTTCTTCATAGGGTTGGAGAGATATTTCAAAGAAAGAAAAAGAAAGCATTGTACGAGGCGCTCGAGAAGGTTAAAGGCGAGCTTATGGTTTTGGGATTCATTTCTTTACTCTTAACATTCGGACAAAACTATATTGCTGAAGTTTGCATACCCTCAAGGTATGCAAATACCATGTTGCCTTGCCCTTATAGAGGGAAATCACATCAAAGCTCCCATGGCATCGAACCCGAAGAACACGAGGAAGACGCCCACGATCACCACCGTAGGCTTCTTTGGTACGAGCATCGACGTCTCGGCGGTGGTGGTCACGTAGAAAGTTGCAAACCAGGATATATGCAACTTATATCTCTAAATGGTTTGCATCAATTACATATCTTCATCTTCTTTCTAGCCGTTCTCCATGTCGTCTTTAGCGGCATAACGATGACTCTCGGAAGATTGAAAGTGTGCTTCTTTAGGCAATTCTTCCGGTCAGTTAGTAGGGCCGATTACTTGTCTCTTAGACATGGTTTCGTCACGGTTCATTTAGCGCCCGGGAGTAAATTTGACTTCCAAAAGTACATCAAAAGATCATTAGAAGATGACTTCAAGGTGGTCGTCGGAATCAGTCCTCTACTATGGGCATCAATGGTGCTTTTTCTGCTTCTCAATGTGATCCTAGCCGTGGGAACAAAGCTGCAAGGAATCATAACACAAATGGCGCTTGAAATCAAGGAAAGGCACGCAGTGGTTCAAGGGATTCCCCTCGTCCAAGTCTCCGATAGACACTTTTGGTTCAGTTGGCCCGTTTTGGTTCTTTATCTCATCCATTACGTCCTCTTCCAGAATGCATTTGAGATTACATATTTCTTTTGGATATGGTATGAATTTGGGTTGAGATCATGCTTTCACCAAAATTTTGATCTTATTATCGTCAGAGTTGCCCTTGGGGTTGGAGTACAGATTTTGTGCAGCTACATTACACTCCCATTATATGCTCTTGTCACTCAGATGGGATCGACTATGAAGAAATCCATATTCGATGAACAAACTTCAAAAGCATTGAAGCAATGGCATAGAAGTGCTTTGAAGAAAAAGAACGAAGGGGGAAAGCCAGATCCAATGCCAATGCGAACACTGGGCGGGGGAGGAGGCGGAGGCAGTGGAAGCCCTCCCGAGTCACCGTCGGGAGACTCGCATGAGTTCCAGCATCATTCAGACCCTCTACGACCACCCAACGACGTCGAAGCCTCCGCCGTTCCTTCGGCCAACATAATCGCCACCGTCGATCTTCAGCAGCAGCAGAATTACGCGAACCGCGACTTGTTGAGCTGA 1428 46.08 MGGGGGGGAQSRELDQTPTWAVAAVCAVIILISIILEKVLHRVGEIFQRKKKKALYEALEKVKGELMVLGFISLLLTFGQNYIAEVCIPSRYANTMLPCPYRGKSHQSSHGIEPEEHEEDAHDHHRRLLWYEHRRLGGGGHVESCKPGYMQLISLNGLHQLHIFIFFLAVLHVVFSGITMTLGRLKVCFFRQFFRSVSRADYLSLRHGFVTVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPLLWASMVLFLLLNVILAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPVLVLYLIHYVLFQNAFEITYFFWIWYEFGLRSCFHQNFDLIIVRVALGVGVQILCSYITLPLYALVTQMGSTMKKSIFDEQTSKALKQWHRSALKKKNEGGKPDPMPMRTLGGGGGGGSGSPPESPSGDSHEFQHHSDPLRPPNDVEASAVPSANIIATVDLQQQQNYANRDLLS 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8377189 8382279 - Carg21887-RA Car05g00852 149238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00852 475 MobiDBLite consensus disorder prediction 394 452 - -
Car05g00852 475 Pfam Mlo family 12 187 IPR004326 GO:0006952|GO:0016021
Car05g00852 475 Pfam Mlo family 187 400 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00852 Car-Chr5:8377189 Car07g00331 Car-Chr7:1665869 0 dispersed
Car05g00852 Car-Chr5:8377189 Car03g00574 Car-Chr3:5487864 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00852 K08472 - csv:101208890 740.725