Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00917 ATGTTTGATTGTGGTTACAAGTCACAACTGATGGGTGGTCAGCGAGAAAAGTTTGTGAGGTTGGATGACTTGGACTCCAGATTGTCATCGCCTTCTGATAGTGGAATGAGAAGATGTGGTTTTAATATAGATGGATTTAACCGTGCAGTCAATGGAAATGATAAGTCGTCTGGATCCTTTAAGAGAGGAATGAGGAAAGGGTCTGAAGGACTTAAATCAATAGGCCGATCACTCAAGTTTGGGGTGTCTCGAGCTGTATTTCCTGAGGATCTTAAAGAGTCAAAGATGAAGATCTTCGACCCTCAAGACAAATTGCTCTTATTTTTCAATAAACTTTTTGTCATATCATGTTTTTTGGCAATATCTGTGGACCCCCTGTTCTTTTATGTTCCTGTTATTAATGGAAACTCAAACTGTCTTGGCATTGATAGAAAGCTGGCAATTACAGTGACAACATTGCGGACAATTATTGATGTTTTCTATATTGTCCACATGGCTCTCCAATTCCGGACAGCTTATATTGCTCCATCATCTCGGGTGTTTGGGAGAGGTGAACTTGTGATTGATCCTACACAAATTGCAAAGCGATACTTGCGGCGGTATTTCATCATTGATTTGGTGTCTGTGCTGCCCCTTCCACAGATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAGGTTCCGATGTATATGTGACGAAACAAGCCCTTCTTTTAATTGTATTCCTACAGTATATCCCAAGATTTCTTAGAGCGGTACCATTGACTTCAGAATTGAAAAGGACAACAGGTGTATTTGCTGAAACTGCTTGGGCAGGTGCTGCATATTATTTGCTATTATATATGCTTGCAAGTCATATAGTTGGAGCATTATGGTACTTGTTAGCTGTGGAACGAAATGATACATGTTGGCAGAAGTATTGTAAGGCCCCGATTTGCAGGAAAGATTTCTTATATTGTGGTAACCAAGGCATGGAAGGTTATGCAACTTGGAACCAGACAGGTGTGGATGGCATTAAGTCAAGTTGCAGACCTGCTGATGATAATGATCTGTTTGATTTTGGAATCTTTAAACAGGCTCTGTCCTCTGGTATTGCCGCATCTAAGAGTTTTATCGTTAAATATTGTTACTGTTTGTGGTGGGGGCTACAAAACTTAAGTACGCTTGGGCAGGGGCTTCAAACAAGCACGTACCCGGGTGAAGTGATCTTTTCTATTGCATTAGCTGTACTTGGTCTCATCCTCTTTGCTCTTCTTATTGGCAACATGCAGACTTATCTTCAATCTCTAACTATAAGACTTGAGGAAATGAGGGTGAAAAAGCGTGATTCGGAGCAGTGGATGCACCACCGCTTGCTGCCACAGGAGCTTCGGGAGAGAGTCAGACGTTACGATCAGTACAAGTGGTTGGAGACCCGTGGGGTGGATGAACAGAGTTTGGTTCAAACTTTACCCAAGGATCTTAGGAGAGATATTAAGCGGCATCTTTGTCTGGCTTTAGTAAGAAGG 1506 41.83 MFDCGYKSQLMGGQREKFVRLDDLDSRLSSPSDSGMRRCGFNIDGFNRAVNGNDKSSGSFKRGMRKGSEGLKSIGRSLKFGVSRAVFPEDLKESKMKIFDPQDKLLLFFNKLFVISCFLAISVDPLFFYVPVINGNSNCLGIDRKLAITVTTLRTIIDVFYIVHMALQFRTAYIAPSSRVFGRGELVIDPTQIAKRYLRRYFIIDLVSVLPLPQIVVWRFLQRSKGSDVYVTKQALLLIVFLQYIPRFLRAVPLTSELKRTTGVFAETAWAGAAYYLLLYMLASHIVGALWYLLAVERNDTCWQKYCKAPICRKDFLYCGNQGMEGYATWNQTGVDGIKSSCRPADDNDLFDFGIFKQALSSGIAASKSFIVKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAVLGLILFALLIGNMQTYLQSLTIRLEEMRVKKRDSEQWMHHRLLPQELRERVRRYDQYKWLETRGVDEQSLVQTLPKDLRRDIKRHLCLALVRR 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8888888 8899007 + Carg11973-RA Car05g00917 149303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00917 502 Pfam Ion transport protein 108 431 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00917 Car12g00767 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00917 Car-Chr5:8888888 Car02g00892 Car-Chr2:6324982 1.40E-158 dispersed
Car02g00919 Car-Chr2:6515664 Car05g00917 Car-Chr5:8888888 3.23E-40 transposed
Car11g00885 Car-Chr11:5508120 Car05g00917 Car-Chr5:8888888 0 transposed
Car12g00767 Car-Chr12:7356547 Car05g00917 Car-Chr5:8888888 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00917 K05391 - csv:101219180 917.531