Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00933 ATGGAGGGAGATATCACAACAATCATGGGGATGGTTATATTGCAAGTTTGCTACGCTGGTTTAAGCATTACCTCAAAGCTAGCCATGCAATCAGGAATGAACCCTCTTGTTCTTCTCACTTACAGGCAATTTTTTGGCACTTTGGCCATTGCTCCCTTTGCTTTCTTTACTGAAAGGAAAACAAGGCCAAAGATCACTTTCCCTGTTCTTGTTCAAATCTTTATCTGTTCTTTATCTGGAGCCACAGCGAACCAGATATTCTTCTTTGTTGGGTTGAAATGCACAAACCCAACCGTTTCAAGTGCTATGGCTAATGTTCTTCCTGCTGCTACTTTTATTCTTGCTGTTGTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAGCCTGGTCTTGCAAAGGTGATGGGAACAATTGTGTGTATATGTGGAGCAATGCTGCTATCTTTCTACCATGGACACACCATTGGCTTAGGTGAATCAAAACTTCATTGGCCTTATGTCGAGAGGATCATGAGCAAAACAAACCCGACGAACCGTCAAGAAAACCGAACCCTCGGCTCGGTTTTGTTGCTTTGCAGCTCGTTCTCTTGGGCATTATGGTTCGTCATTCAAGCAAGATTGAGTGTCAAGTTCAAAGCTCCCTATACAAGTACAACGTTGTTGTGCTTCATGGCCTTTTTTCAATGTGGACTCATAGCTGTGATTTCCGAGCACAACGTCGCTGCTTGGTCATTGAAAAGTCCGATCCGACTCGTCTCAGCTCTTTACACGGGAGTTGTGTGTTCGGGATTGACATTTAGCATCACTTCTTGGATTATACAAAGAAAAGGGCCTCTCTATGTCTCAATTTTCACCCCATTGTTGCTTATAATTGTGGCCATCTTTAGCTGGGCTCTCCTCCACGAACAGCTCTACGTCGGAACTGTTCTTGGCTCGATTTTGATAATCATTGGGCTATATGGAGTGCTATGGGGAAAGTCCAAAGAGATGAAAGTAGAAGAGGAAGAGAAGGTGGAAAAGGCAACAAATGGGAGTCAAAAAGATGACGTGGAATTGCAAATCATAAACATCAAATAA 1077 42.99 MEGDITTIMGMVILQVCYAGLSITSKLAMQSGMNPLVLLTYRQFFGTLAIAPFAFFTERKTRPKITFPVLVQIFICSLSGATANQIFFFVGLKCTNPTVSSAMANVLPAATFILAVVFRQESVRIKTKPGLAKVMGTIVCICGAMLLSFYHGHTIGLGESKLHWPYVERIMSKTNPTNRQENRTLGSVLLLCSSFSWALWFVIQARLSVKFKAPYTSTTLLCFMAFFQCGLIAVISEHNVAAWSLKSPIRLVSALYTGVVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAIFSWALLHEQLYVGTVLGSILIIIGLYGVLWGKSKEMKVEEEEKVEKATNGSQKDDVELQIINIK 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9032763 9035380 + Carg11990-RA Car05g00933 149319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00933 358 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020|GO:0016021
Car05g00933 358 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00933 Car11g01025 CCT
Car05g00933 Car11g01025 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00933 Car-Chr5:9032763 Car11g01024 Car-Chr11:7380756 1.93E-138 dispersed
Car05g00933 Car-Chr5:9032763 Car04g01163 Car-Chr4:6685745 1.45E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00933 - - csv:101217670 550.051