Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00944 ATGGAAGGCCCTCTGTTGCGAGAAGTGTGCGCCCTGTACGACCAAATCTCGAGCCTTGCTAGCCTCAAGCCTTCCAAAAATGTCGACACTCTCTTCACCCAACTAGTCCTCACGTGCTCCCCGCCCGCCCCTGGCCTTGATATCGCCTCTTTGCCTCAGCCACTTCAAGCCATGAGGGCTCATCTCATCCGTCTATGCGCCACCGCTGAGGCGCTTCTTGAAGTTCATTTCTCTTCCATTTTGGCTTCCTTTGAGAATCCCATTCATAACTTGTCTATCTTTCCTTATTACTCTAATTACTTGAAGCTTTCTCTTCTCGAGTTCGATATTCTTACCTCTCATTGTCGTCGGGTGCCCTCTAGCATTGCGTTCGTTGGCTCTGGCCCCCTCCCGCTTTCCTCCATTGTCATGGCGTCCACTCATCTTAAGGGTACTATTTTCCACAACTTTGACATCGACCCAGTTGCAAACTCCATGGCGGGGCGGTTGGTTTGCTCGGACTCAGATTTATCGAAACGGATGGTGTTTCACACGGCAGACGTAATGGAGGTGACGGAGGCGTTTGGAGAGTACGAGGTGGTGTTTTTAGCAGCATTGGTAGGGTTGGAGGAGGAAGAGAAAGGGAGGGTTTTGAGGCATTTAGGGAAGCATATGGCACCCGGAGCTTATTTGATGCTAAGGAGTGCACATGGAGCTAGAGCATTTCTCTACCCTGTTGTTGACGTTCGTGACGTCGAAGCATCTGGGTTCGAGATTTTGTCCGTGTTTCACCCCACTGATGAAGTTATAAACTCCGTTGTTATTGCAAGAAAGGTATCTGATCTCATTCCTGACAACGATAATTATAACAACAACGACACAGATGATGAAAAACGAGGTGTTTTAGTTAATACCCCTATAATATTGGCCGAGAAGTGCTCGGGATTTAAAGACTTCGGTCCCATGATCGAGGAGCTTGCCATAGAAGAACAACTTTCTTGA 981 48.32 MEGPLLREVCALYDQISSLASLKPSKNVDTLFTQLVLTCSPPAPGLDIASLPQPLQAMRAHLIRLCATAEALLEVHFSSILASFENPIHNLSIFPYYSNYLKLSLLEFDILTSHCRRVPSSIAFVGSGPLPLSSIVMASTHLKGTIFHNFDIDPVANSMAGRLVCSDSDLSKRMVFHTADVMEVTEAFGEYEVVFLAALVGLEEEEKGRVLRHLGKHMAPGAYLMLRSAHGARAFLYPVVDVRDVEASGFEILSVFHPTDEVINSVVIARKVSDLIPDNDNYNNNDTDDEKRGVLVNTPIILAEKCSGFKDFGPMIEELAIEEQLS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9107871 9109214 - Carg12001-RA Car05g00944 149330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00944 326 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Car05g00944 326 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00944 Car11g01035 CCT
Car05g00944 Car12g00985 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00944 Car-Chr5:9107871 Car10g00382 Car-Chr10:1902024 1.09E-91 dispersed
Car11g01035 Car-Chr11:7784098 Car05g00944 Car-Chr5:9107871 8.34E-127 transposed
Car12g00985 Car-Chr12:9913211 Car05g00944 Car-Chr5:9107871 6.67E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00944 K05953 - csv:101203651 469.159