Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00962 ATGGGGCATTTCTCCACCATGTTCGATGGGCTGGCAAGGTCGTTTTCCTTCAAGAGAGGTAGAAACTCGGCGAGTCTAGTTGACGAGGGAGGGCGAGAAGCTGCAAAAGCCATGATTAAGGATGCGAAAAGGAAAGACTCGATATTGTGCACCACTGGTGTCGTCAATGCTGAAGGTTCGAATACTTTTGCTTCGGTGTTCTCGAAAAAAGGCGAAAAAGGAGTAAACCAAGATTGCTGCATTGTATGGGAGGAATTTGGATGCCAAGAAGACTTGATATTTTGTGGGGTTTTCGATGGGCACGGACCGTGGGGTCATTTTGTTGCGAAGGCGGTAAGAGAATCGATGCCACCATCTTTGCTGTGCCATTGGCAGCAAGGACTTGCTCAAGCTTTCCTCGACCCGGAATTGGATTCAGAAAAGAAGCATCAGCGGTTCGACATATGGAAGCATTCCTATTTAAGAACTTGTGCTGCCATCGATCACGAACTCGAGCAGCACCGTAAAATCGATACGTTTTACAGTGGAACAACTGCACTGTCCATTGTTAAACAGGGCGAGCTAGTCGTTTTAGCCAACGTTGGCGATTCCCGAGCAGTCTTGGGTACTACTTCTGATGATGGAAGTGTAGTACCGGTTCAGCTCACCGTCGACTTCAAACCGAACCTACCTCAGGAGGCCGAGCGGATAATTCAATGCAATGGGAGGGTGTTTTGTTTAAATGACGAGCCGGGTGTTCATAGGGTCTGGCTTCCGAACGAGGAAACACCCGGGTTGGCGATGTCGAGAGCCTTCGGTGATTATTGTATTAAAGAATTTGGACTCATTTCTGTGCCAGAAGTTACATATAGAAGTATAACCAGCAGAGACCAATTCATTATATTGGCAACTGATGGGGTATGGGATGTTGTCACCAACCAAGAAGCAGTAGAGATTGTATCATCGACACCAGATAGAACGAAATCGTCGAAACGTCTGGTCGAGTGTGCTGTTCGGGCATGGAAACGGAAGAGACGAGGCATCGCAATGGATGATATGTCAGCTATCTGCCTCTTCTTCCACTCATCAGAGCAAGAACATCACCTTGTAACTTATTAG 1098 47.27 MGHFSTMFDGLARSFSFKRGRNSASLVDEGGREAAKAMIKDAKRKDSILCTTGVVNAEGSNTFASVFSKKGEKGVNQDCCIVWEEFGCQEDLIFCGVFDGHGPWGHFVAKAVRESMPPSLLCHWQQGLAQAFLDPELDSEKKHQRFDIWKHSYLRTCAAIDHELEQHRKIDTFYSGTTALSIVKQGELVVLANVGDSRAVLGTTSDDGSVVPVQLTVDFKPNLPQEAERIIQCNGRVFCLNDEPGVHRVWLPNEETPGLAMSRAFGDYCIKEFGLISVPEVTYRSITSRDQFIILATDGVWDVVTNQEAVEIVSSTPDRTKSSKRLVECAVRAWKRKRRGIAMDDMSAICLFFHSSEQEHHLVTY 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9206584 9208676 - Carg12020-RA Car05g00962 149348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00962 365 Pfam Protein phosphatase 2C 87 327 IPR001932 -
Car05g00962 365 ProSiteProfiles PPM-type phosphatase domain profile. 63 353 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00962 Car-Chr5:9206584 Car01g00441 Car-Chr1:2524632 5.11E-120 dispersed
Car10g01005 Car-Chr10:9726643 Car05g00962 Car-Chr5:9206584 2.73E-71 wgd
Car12g01007 Car-Chr12:10047018 Car05g00962 Car-Chr5:9206584 0 wgd
Car17g00316 Car-Chr17:1976767 Car05g00962 Car-Chr5:9206584 3.36E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00962 - - cmax:111493912 742.265