Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01031 ATGGCTACCGATTCTCATTCCCCTACTCCGAGGGCTCTTCTCTGTAATGCTGGAGCTGGTGCCGCTGCTGGAGTTCTTGCTGCTACGTTTGTGTGCCCTTTGGATGTTATTAAGACTAGATTTCAGGTTCATGGACTGCCAAACATTGGAAAAGGGAGTCTCATACTTGGTAGTCTGAAACAAATTGCTCATGCGGAGGGGCTGCGTGGAATGTATAGAGGACTCTCACCTACTGTGCTTGCACTACTTCCTAACTGGGCTGTAAATGAAAGGCATCAGCTTTCAATAGGTGCTAATATGTTGGCTGCTTCTGGTGCTGGGGCTGCTACAGCTATTGCAACTAATCCTCTATGGGTTGTTAAGACCAGACTTCAGGGAATGAAATCTGGTGTCCTACCGTATAGAAACACAGTTTCAGCCTTGAAGAGAATAGCCTATGAAGAAGGCATCCGTGGATTGTACAGTGGTCTTGTGCCTGCTCTGGCTGGTGTTAGTCACGTCGCGATCCAGTTTCCGACATACGAGAAAATAAAAAGCTATTTGGCTAGCAGAGATAATACGACGACGGATAAACTCTCCGCTCGTGACGTTGCAGTCGCCTCATCTGTCTCCAAGATATTCGCGTCCACATTGACTTATCCACATGAGGTTGTACGTTCCAGGCTTCAGGAACAAGGGTTCCACTCCGAGAAGCGTTATTCGGGCGTAACCGATTGCGTAAAGAAAGTGTTTCAGCAAGATGGTCTCCCCGGTTTCTATCGAGGGTGCGCAGCCAACCTTCTTAGGACAACGCCTGCAGCTGCCATCACATTTACCAGCTTTGAGATGATCCACCGTTCTCTTCTCAACTTATTTCCTTCTGATCCACACCAACACACATTATGA 885 47.8 MATDSHSPTPRALLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPNIGKGSLILGSLKQIAHAEGLRGMYRGLSPTVLALLPNWAVNERHQLSIGANMLAASGAGAATAIATNPLWVVKTRLQGMKSGVLPYRNTVSALKRIAYEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKSYLASRDNTTTDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGFHSEKRYSGVTDCVKKVFQQDGLPGFYRGCAANLLRTTPAAAITFTSFEMIHRSLLNLFPSDPHQHTL 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9820968 9823764 + Carg12089-RA Car05g01031 149417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01031 294 ProSiteProfiles Solute carrier (Solcar) repeat profile. 192 280 IPR018108 -
Car05g01031 294 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 80 IPR018108 -
Car05g01031 294 ProSiteProfiles Solute carrier (Solcar) repeat profile. 94 180 IPR018108 -
Car05g01031 294 Pfam Mitochondrial carrier protein 16 89 IPR018108 -
Car05g01031 294 Pfam Mitochondrial carrier protein 93 182 IPR018108 -
Car05g01031 294 Pfam Mitochondrial carrier protein 198 282 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01031 Car-Chr5:9820968 Car15g00866 Car-Chr15:5109807 5.20E-118 dispersed
Car12g01045 Car-Chr12:10307676 Car05g01031 Car-Chr5:9820968 1.36E-08 wgd
Car17g01010 Car-Chr17:8030483 Car05g01031 Car-Chr5:9820968 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01031 K15115 - csv:101204681 493.426