Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01101 ATGCTGTTTATGTTTGAGTCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGGCGTGTTAGAGTGGATACTCAGACCTTAATGGTGCATCGTTGTGGAAAGTGGGTGAAGCTACCTGGAACTGAGCTTTTGCCAGGAGATGTTGTCTCTGTAGGGCGTGATTCTGGTCGGAGTGGTGAAGATAAGTCTGTACCTGCTGATATGCTTATCTTGGCTGGAAGTGCTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACACCACAATGGAAGGTTTCAATATCTGGGAGAGGAATTGAGGAGAAGTTATCAGCTAAAAGAGACAAAAGTCATATGTTATTTGGTGGGACCAAAATATTGCAGCATACTCCAGATAAGACCTTTCCTCTTAGAACCCCTGATGGTGGCTGCCTAGCAGTTGTTTTGAGGACTGGTTTCGAAACAAGTCAAGGGAAACTAATGCGCACAATTTTATTTTCTACGGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCCTATTTATTATGTTCTTAGTTGTATTTGCCGTTATAGCTGCTGGTTACGTACTTGTAAAGGGATTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACTTCTGTAATTCCTCCTGAACTACCAATGGAACTGTCAATAGCCGTTAATACATCATTAATTGCTCTGGCACGTCGGGGAATATTTTGTACAGAGCCTTTCCGAATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTCGATAAAACAGGAACGTTGACATCAGATGACATGGAGTTTCGAGGAGTAGTTGGGGTGAGTGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGTCTTTGCGCACAGTTGAAATTCTGGCTTCTTGCCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCACTCAAGGGAGTTGATTGGGCTTACAAATCTGATGAGAAAGCCATTCCCAGAAAGGGAAGTGGGCACGCTGTCCAGATTGTTCAGAGGCACCACTTTGCTTCACATTTGAAGAGAATGGCAGTTGTTGTACGCCTTCAAGAGGAATTTCTTGCATTTGTGAAGGGTGCCCCCGAAACCATCCAGGAGAGGCTCACGGATATACCTTCATTTTATGTTGAGACGTATAAGAAGTATACACGACAAGGTTCCCGTGTCCTTGCTCTTGCTTACAAATCACTTCCAGACATGACAGTTAGTGAAGCTAGAGCCCTGGATAGGGACGTGGTGGAGAGTGACCTTACATTTGCAGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCAGATTCGGCTACAATATTATCTGAGCTTAAAGGATCATCCCATGACTTGGTAATGATTACTGGTGACCAAGCTTTAACAGCATGCCACGTAGCTAGCCAAGTTCATATTACCTCAAAGCAGATTTTAATTCTCAATTCAAAGAAGGGAACTGAGGAATATGAATGGCTCTCCCCAGATGAGTTACAGACAGTTCCCTACAGAGAGAAAGAGGTGGGAGATTTATCAGAGATGTATGATCTGTGTATTGGAGGTGACTGCATCGAAATGCTACAACGCACCTTCACTGTGCTGGATGTTATTCCATACGTTAAGGTTTTTGCAAGAGTTGCTCCTGAGCAGAAAGAACTCATATTGACCACTTTTAAGACAGTAGGAAGAATGACGTTGATGTGTGGGGATGGAACGAACGATGTCGGTGCTTTGAAACAGGCCCATGTAGGAATTGCTCTCCTGAACGCTGTCCCTCCTCAAAGTGGCAACTCTTCTTCAGAAGCATCTAAAGATGACGCTGCTCGGTCTGCAAAGTCGAAGAAATCTAAGCTTTCATCCGAATCATCAGGAAAACCACTTCTAGCTGGAGAAGGTTCTTCAAAAAGCAAAGGTAGTGCAAAACTGGATTCTGCTACTGAGCAAGCTAGTAACCGTGCGCGGACACCTGCCGAGATGCAAAGACAGAAGCTAAAGAAACTTATGGATGAGTTAAATGAAGAGGGTGATGGGCGCTCAGCCCCTATTGTCAAGCTTGGAGATGCATCCATGGCATCACCATTCACAGCAAAGCATGCTTCTGTTGCCCCGACTACGGACATTATTCGCCAAGGTAGAAGTACTCTGGTGACAACTCTTCAGATGTTTAAAATACTCGGTCTCAACTGCCTCGCTACCGCCTATGTACTCAGTGTTATGTATTTGGACGGTGTCAAGCTTGGCGATGTTCAAGCGACCATCAGTGGAGTATTCACAGCAGCCTTCTTTCTGTTCATCTCACATGCGCGCCCCCTTCCAACACTTTCAGCTGAACGCCCCCATCCACACATCTTTTGTTCTTATGTTCTCCTTTCTCTGTTAGGCCAATTTGCTATCCACTTATTTTTCTTGATGTCTTCAGTGAAAGAAGCCGAAAAGCACATGCCTGATGAATGTATAGAGCCAGATTCAGACTTTCATCCCAACTTGGTTAACACAGTTTCATACATGGTAAGCATGATGCTTCAGGTGGCAACCTTTGCTGTAAACTACATGGGTCATCCCTTCAACCAGAGCGTATCCGAAAACAAGCCATTCCTATACGCTCTCTTGGCTGCGGTTGGTTTCTTCACCGTCATTACCTCGGATTTGTTCAGAGATCTCAACGACTGGCTGAAACTCGTTCCACTGCCTGCGGGATTGAGGGATAAGCTTCTAGCTTGGGCACTTCTTATGTTCTTGTGCTGTTACTCCTGGGAAAGACTATTGAGATGGATGTTCCCAGGTAAAATCCCGGCATGGCGAAAGCGACAACGACTGGCGGCTGCGAATCTGGAGAAGAAGAAACAGCTGTGA 2895 44.77 MLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSVGRDSGRSGEDKSVPADMLILAGSAIVNEAILTGESTPQWKVSISGRGIEEKLSAKRDKSHMLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFIMFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGVSDKEDLETDMTSVSLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWAYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFLAFVKGAPETIQERLTDIPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSEARALDRDVVESDLTFAGFAVFNCPIRADSATILSELKGSSHDLVMITGDQALTACHVASQVHITSKQILILNSKKGTEEYEWLSPDELQTVPYREKEVGDLSEMYDLCIGGDCIEMLQRTFTVLDVIPYVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPQSGNSSSEASKDDAARSAKSKKSKLSSESSGKPLLAGEGSSKSKGSAKLDSATEQASNRARTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPHIFCSYVLLSLLGQFAIHLFFLMSSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPAGLRDKLLAWALLMFLCCYSWERLLRWMFPGKIPAWRKRQRLAAANLEKKKQL 964
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10576093 10596077 - Carg23420-RA Car05g01101 149487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01101 964 ProSitePatterns Hypothetical cof family signature 2. 582 604 - -
Car05g01101 964 MobiDBLite consensus disorder prediction 606 675 - -
Car05g01101 964 Pfam haloacid dehalogenase-like hydrolase 258 486 - -
Car05g01101 964 MobiDBLite consensus disorder prediction 651 671 - -
Car05g01101 964 ProSitePatterns E1-E2 ATPases phosphorylation site. 263 269 IPR018303 -
Car05g01101 964 Coils Coil 668 688 - -
Car05g01101 964 MobiDBLite consensus disorder prediction 619 633 - -
Car05g01101 964 Pfam E1-E2 ATPase 29 241 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01101 Car-Chr5:10576093 Car09g00244 Car-Chr9:1342769 1.69E-20 dispersed
Car12g01065 Car-Chr12:10418655 Car05g01101 Car-Chr5:10576093 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01101 K14950 - csv:101215828 1767.28