Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01149 ATGGGTACTCCAGTTAACATTATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGAAGATGCTTGGATTGATGGACAAGTATCCAAGATAACAGGGCAGGAAGCTGAGATCGAAGCCAGCAATGGAAAAAAAGTTGTTGCAAAATTAGCCAAAATATATCCCAAAGATATGGAGGCTCCAGCTGGTGGTGTCGATGACATGACGAAGCTATCTTACTTGCATGAGCCTGGAGTTCTACAAAATTTAAAAACTCGATATGAACTCAACGAAATCTACACATACACTGGCAATATTCTTATTGCAATTAATCCATTCCAAAGATTGCCTCATCTTTATGATGGTCACATGATGCATCAATACAAAGGAGCACCATTTGGAGAACTGAGCCCTCATGTGTTTGCTGTTGCTGATGTTGCATACAGGGCAATGATCATTGAGGGTAAAAGCAATTCAATTCTGGTCAGTGGTGAAAGTGGAGCAGGGAAAACTGAAACCACAAAAATGCTCATGCGTTACCTTGCATTTTTAGGTGGCAGGGTGGCCACTGAAGGACGAACAGTTGAGCAACAAGTTCTTGAGTCAAATCCAGTGCTTGAAGCTTTTGGAAATGCAAAAACTGTCAGAAATAACAATTCCAGAAACTCATTTAAGCAGCAAATTTTCATTTCTCAAATTGTTGCTGAGAATTATTCTCTTCATACAGTCGCTTTGGTAAATTTGTTGAAATCCAGTTTGACAAGCATGGAAGAATCTCAGGAGCAGCTATCTGAACTTACCTCCTCGAGAGATCTCGTGTTTGCCAAGTGTCTGATCCCGAGCGCAATTATCATTGCTTTTACCTCCTTTGTGCTGCACCTCAGGAGGTTCTCAGCAGAAATTGAAAAATACAAGCTGGGAAACCCCAAGTCATTTCATTATCTTAATCAATCAAATTGCTATGAGCTGGTTGATGTAAGTGATGCTCATGACTATCTTGCCACTAGAAGAGCTATGGATATCGTTGGAATAAGTGCGAGGGAGCAGGAAGCAATCTTTCGAGTTGTTGCTGCAATTCTTCATCTTGGAAACATTGTATTTACCAAGGGAAAAGATGTCGATTCATCAGTTCCAAAAGATGACAATGCTAAGTTTCATCTTAAAATGACTGCAGAGCTTCTCATGTGTGATAATGCTGGCCTCGAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTCATAAAACGTAGCTTGGATCCTCAAAGTGCGGCTGTCAGCCGTGATGGTTTGGCCAAAACTATATATTCTCGACTATTTGACTGGCTGGTTGATAAGATTAATGTCTCTATTGGACAAGATCCTAATTCCAAGTCCCTGATTGGAGTCCTTGATATCTACGGTTTTGAAAGCTTCAAAGCTAACAGTTTTGAGCAGTTCTGTATTAATTTCACAAACGAGAAGTTACAGCAACATTTCAATCAGCACGTTTTCAAAATGGAACAAGAAGAATACACAAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTCGACAACCAAGATGTGTTGGATCTCATTGAAAGGAAACCTGGTGGAATTGTGGCTCTCCTTGACGAAGCTTGCATGTTTCCAAAATCAACACATGAAACATTTGCAAACAAGCTCTATCAGACTTTCAAAACACATAAGCGGTTTCTAAAGCCAAAACTTTCTCGAACAGATTTTACGATCGCTCATTATGCTGGAGAGGTTTTGTATCAATCTGAACAGTTTTTGGACAAAAACAAGGATTATGTTGTTCCTGAACATCAGGATTTGTTAGGTGCCTCTAAATGTCCATTTGTAGCCGGTCTTTTCCCCCCACTCAAAGAAGAATCTGCAAAATCTTCCAAGTTTTCTTCAATTGGGTCTCGCTTTAAGCTACAACTACAACAATTAATGGAGACATTAAATTCCACGGAACCTCACTACATCAGATGTGTGAAGCCAAACAACCTCTTAAAACCTGCCATCTTTGAGAATGTCAACATAATGCAACAACTGCGTTGTGGTGGTGTCTTAGAGGCAATCAGAATCAGTTGTGCTGGGTACCCTACTCGTCGTGCATTCTTTGAATTCATTAACCGATTCGGAATTTTAGCTCAAGAATCATTAGAAGGAAACTATGATGAAAAAGCAGTGTGCAAAAAGATATTAGAACAGCAGGGACTTAAAGGCTTTCAGATAGGTAAAACAAAAGTATTCCTGAGGGCTGGTCAGATGGCTGAATTAGATGCTCGGAGAGCAGAGAAACATGCTCGAAGATTTGAAGCGAGAACAGCCTATAAAAGACTACAAAGCTCAGTGCTTGTTGTGCAAACTGGTTTAAGGGCAATGGCAGCTAGGAATGAATTTAGGTTTAGGAAGCAGACAAAGGCAGCAATTATCATTCAGGCTCGATGGCGTTGCCATAAAGCTGCCTCGTACTATACGAAACTTCAGAGAGGCTCAATAGTTGCACAATGTAGATGGAGGGGGAAAATTGCTAGAAAGGAACTTAGAAAACTCAAATTGGCTGCAAGGGAGACTGGTGCACTTAAAGAAGCAAAGGACAAGTTGGAAAAGAAAGTGGAGGAACTTACTTGGCGCATACAATTAGAAAAACGCCTAAGGACGGACCTGGAAGAGGCAAAAGCACAGGAGATAGCAAAATTACAAAATTCTTTGCAAGAACTGCAGGCAAAAGCTGACGAAACTAACTCATTGCTTGTTAAGGAGCGAGAGGCTGTGAAGAAGGCTGTTGAAGAAGAACCTGCTGTTATACAAGAAACCCAAGTGCTGGTTGAAGATACTAAGAAAATTGATGATTTGACAGCAGAAGTAGAAAGCTTAAAGACGTCGCTAGAGACGGAGAAAAACAGAGCGGATGAATATGAGAAAAAATATGAAGAGAAGCTTTCCAATTTGGAATCAGAGAATCAAGTTTTACGCCAACAAGCTGTGTCTATGGCACCTAATAAAATCCTCTCGGGACGGTCTAGATCGATTCTCCAGAGAGGTGCTGAAAGTGGTCATTATGGAGGGGAAGGGAGGACGCCTTTGGATCTACACAGCCCTTCTATTAACCAAAGGGATTCAGAAGTAGAGGATAAACCTCAAAAATCACTTAATGAGAAACAGCAAGAGAATCAAGAATTGCTCATTAGATGTATTGCACAGCACCTTGGCTTTGCAGCAAACAGGCCAATAGCTGCTTGTATCATCTACAAGTGCTTACTTCAGTGGCGGTCATTTGAAGTCGAACGCACCAGCGTATTTGATAGGATAATTCAAACTATAGGCCATGCTATCGAGACTCAGGATAACAACGACATCTTGGCCTATTGGTTATCCAACGCTTCGACGCTTCTCTTACTGCTTCAGCGTACTTTGAAAGCAAGTGGTGCTGCTGGAATGGCTCCACAGCGTCGGCGATCGTCGTCAGCTACACTATTTGGGAGGATGACTCAAAGTTTTCGAGGAGCTCCACAAGGAGTCAGTCTATCCTTAATCAATGGTGGAACTAGCGGTGGAGTGGACACTTTAAGGCAGGTTGAAGCAAAGTACCCTGCTTTGCTTTTCAAGCAGCAGCTGACAGCTTATGTAGAGAAAATTTATGGAATGATAAGAGATAATCTTAAGAAAGAAATTTCTCCACTGCTAGGATTATGCATCCAGGCACCAAGAACATCAAGAGCAAGTTTGGTGAAGGGATCCTCTCGTTCGGTTGCCACCACGGAGGCGCAGCGTGCCTTAATCGCTCACTGGCAAGGAATCGTGAAGAGCCTCGGGAACTTCCTTAACACCTTGAAAGCAAATCATGTTCCCCCGTTTTTGGTTCGTAAAGTCTTCATACAAATATTTTCTTTCATCAACGTTCAACTATTTAACAGTCTTCTATTACGACGAGAATGTTGTTCGTTTAGCAACGGCGAATACGTCAAAGCTGGGCTGTCTGAGTTAGAGGATTGGTGTTATAAGGCTACTGATGAGTATGCAGGTTCGGCTTGGGACGAGCTAAAGCATATTAGACAAGCGATCGGGTTTCTGGTTATTCATCAAAAGCCGAAAAAGACGCTGGACGAAATAAGTCACGATCTATGTCCTGTACTAAGCATACAGCAGCTGTATCGTATCAGTACGATGTACTGGGACGACAAATACGGCACCCATAGTGTCTCTCCTGATGTTATATCCAATATGAGGGTGTTAATGACGGAAGATTCGAACCATGCAATTAGCAATTCATTTCTATTGGACGACGACTCGAGCATTCCATTCTCAGTTGATGATTTATCGAAGTCCATGGAACAAATAGACATCGGAGACATCGAACCACCGCCACTGATTCGAGAGAACTCGGGCTTTAGTTTCTTGTTGCCACGAACAGACTAA 4398 41.81 MGTPVNIIVGSHVWIEDPEDAWIDGQVSKITGQEAEIEASNGKKVVAKLAKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMHQYKGAPFGELSPHVFAVADVAYRAMIIEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRVATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSRNSFKQQIFISQIVAENYSLHTVALVNLLKSSLTSMEESQEQLSELTSSRDLVFAKCLIPSAIIIAFTSFVLHLRRFSAEIEKYKLGNPKSFHYLNQSNCYELVDVSDAHDYLATRRAMDIVGISAREQEAIFRVVAAILHLGNIVFTKGKDVDSSVPKDDNAKFHLKMTAELLMCDNAGLEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINVSIGQDPNSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIERKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFLKPKLSRTDFTIAHYAGEVLYQSEQFLDKNKDYVVPEHQDLLGASKCPFVAGLFPPLKEESAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGILAQESLEGNYDEKAVCKKILEQQGLKGFQIGKTKVFLRAGQMAELDARRAEKHARRFEARTAYKRLQSSVLVVQTGLRAMAARNEFRFRKQTKAAIIIQARWRCHKAASYYTKLQRGSIVAQCRWRGKIARKELRKLKLAARETGALKEAKDKLEKKVEELTWRIQLEKRLRTDLEEAKAQEIAKLQNSLQELQAKADETNSLLVKEREAVKKAVEEEPAVIQETQVLVEDTKKIDDLTAEVESLKTSLETEKNRADEYEKKYEEKLSNLESENQVLRQQAVSMAPNKILSGRSRSILQRGAESGHYGGEGRTPLDLHSPSINQRDSEVEDKPQKSLNEKQQENQELLIRCIAQHLGFAANRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVSLSLINGGTSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVATTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFIQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEDWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNHAISNSFLLDDDSSIPFSVDDLSKSMEQIDIGDIEPPPLIRENSGFSFLLPRTD 1465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10977233 10990965 - Carg23000-RA Car05g01149 149535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01149 1465 MobiDBLite consensus disorder prediction 1009 1047 - -
Car05g01149 1465 Pfam DIL domain 1284 1387 IPR002710 -
Car05g01149 1465 ProSiteProfiles Dilute domain profile. 1095 1408 IPR002710 -
Car05g01149 1465 Coils Coil 844 917 - -
Car05g01149 1465 Coils Coil 935 987 - -
Car05g01149 1465 MobiDBLite consensus disorder prediction 1030 1046 - -
Car05g01149 1465 ProSiteProfiles IQ motif profile. 821 850 IPR000048 GO:0005515
Car05g01149 1465 Pfam Myosin head (motor domain) 64 213 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g01149 1465 Pfam Myosin head (motor domain) 292 745 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g01149 1465 ProSiteProfiles Myosin motor domain profile. 62 757 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g01149 1465 ProSiteProfiles IQ motif profile. 798 825 IPR000048 GO:0005515
Car05g01149 1465 Pfam Myosin N-terminal SH3-like domain 9 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car05g01149 1465 ProSiteProfiles IQ motif profile. 773 802 IPR000048 GO:0005515
Car05g01149 1465 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car05g01149 1465 Pfam IQ calmodulin-binding motif 799 818 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01149 Car-Chr5:10977233 Car10g00670 Car-Chr10:3442085 0 dispersed
Car12g01112 Car-Chr12:10831623 Car05g01149 Car-Chr5:10977233 3.90E-86 dispersed
Car12g01111 Car-Chr12:10826809 Car05g01149 Car-Chr5:10977233 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01149 K10357 - csv:101206606 2456.02