Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01151 ATGGCGAACCGTTGGTGGACTTCCAGCCAGATGGGTCTTCCCGGAGTTGATCATACGTCGACGAGCTCCTCCGCCATGAGAATACCAGATCTGGGGATCTCCATGAACGACAACAACGGCGCTGTCAACAGCGGTGGCGGTGATGACGATGACGATAGAGATAACGGTGGCGATGAACCTAAGGAAGGTGCTGTTGAAGTCCCTACGCGCCGCCCCCGTGGCCGCCCGGCTGGCTCCAAGAATAAGCCTAAACCACCTATCTTTGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTTATGGAGATTTCTAACGGAGCTGATATCGCCGAAAGTGTCGCTCACTTTGCTCGTCGGCGACAAAGAGGGGTTTCTGTGCTTAGTGGCAGCGGCACGGTGACGAACGTTACACTCCGGCAACCGTCTGCGCCCGGTGCAGTCTTAACCCTTCAAGGGCGGTTCGAGATTCTCTCGTTGACTGGAACTTTCCTCCCTGGACCAGCCCCACCTGGCTCGACTGGACTCACGATCTACTTAGCCGGTGGCCAAGGGCAGGTGGTGGGCGGTAGCGTTGTCGGGCCACTCACCGCTGCCGGGCCAGTGATGGTGATCGCCGCAACGTTTTCCAACGCTACATACGAAAGGTTACCTCTAGAGGAGGAGGAAGAAGGCGGGGGAGGAGCACAAGGGCATACATCAGCAGGCGGTGGCACCGGCGACGGTTCGCCGCAAGGCATCGGAGGAGGAGTCGGAGATCTGTCAGCTATGCCACCACTCTACAATTTACCACCAAATTTGCTACCAAATGGCGGCGGCGGCGGCGGACAAATGAACCAGGAGGCTTATTCATGGGCTCACGGCGGCCGACCGTCGTTTTAA 882 57.37 MANRWWTSSQMGLPGVDHTSTSSSAMRIPDLGISMNDNNGAVNSGGGDDDDDRDNGGDEPKEGAVEVPTRRPRGRPAGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAHFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLTLQGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEEGGGGAQGHTSAGGGTGDGSPQGIGGGVGDLSAMPPLYNLPPNLLPNGGGGGGQMNQEAYSWAHGGRPSF 293
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 10998556 10999547 + Carg23002-RA Car05g01151 149537
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car05g01151 293 MobiDBLite consensus disorder prediction 219 293 - -
Car05g01151 293 MobiDBLite consensus disorder prediction 1 94 - -
Car05g01151 293 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Car05g01151 293 MobiDBLite consensus disorder prediction 1 29 - -
Car05g01151 293 ProSiteProfiles PPC domain profile profile. 94 232 IPR005175 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01151 Car-Chr5:10998556 Car06g00967 Car-Chr6:7419418 8.53E-72 dispersed
Car12g01114 Car-Chr12:10848560 Car05g01151 Car-Chr5:10998556 5.68E-135 wgd
Car14g01614 Car-Chr14:13016584 Car05g01151 Car-Chr5:10998556 2.08E-76 wgd
Car17g00156 Car-Chr17:964357 Car05g01151 Car-Chr5:10998556 7.71E-61 wgd
Car05g01151 Car-Chr5:10998556 Car06g01150 Car-Chr6:8516857 4.06E-93 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01151 - - csv:101220902 427.172