Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g01151 | ATGGCGAACCGTTGGTGGACTTCCAGCCAGATGGGTCTTCCCGGAGTTGATCATACGTCGACGAGCTCCTCCGCCATGAGAATACCAGATCTGGGGATCTCCATGAACGACAACAACGGCGCTGTCAACAGCGGTGGCGGTGATGACGATGACGATAGAGATAACGGTGGCGATGAACCTAAGGAAGGTGCTGTTGAAGTCCCTACGCGCCGCCCCCGTGGCCGCCCGGCTGGCTCCAAGAATAAGCCTAAACCACCTATCTTTGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTTATGGAGATTTCTAACGGAGCTGATATCGCCGAAAGTGTCGCTCACTTTGCTCGTCGGCGACAAAGAGGGGTTTCTGTGCTTAGTGGCAGCGGCACGGTGACGAACGTTACACTCCGGCAACCGTCTGCGCCCGGTGCAGTCTTAACCCTTCAAGGGCGGTTCGAGATTCTCTCGTTGACTGGAACTTTCCTCCCTGGACCAGCCCCACCTGGCTCGACTGGACTCACGATCTACTTAGCCGGTGGCCAAGGGCAGGTGGTGGGCGGTAGCGTTGTCGGGCCACTCACCGCTGCCGGGCCAGTGATGGTGATCGCCGCAACGTTTTCCAACGCTACATACGAAAGGTTACCTCTAGAGGAGGAGGAAGAAGGCGGGGGAGGAGCACAAGGGCATACATCAGCAGGCGGTGGCACCGGCGACGGTTCGCCGCAAGGCATCGGAGGAGGAGTCGGAGATCTGTCAGCTATGCCACCACTCTACAATTTACCACCAAATTTGCTACCAAATGGCGGCGGCGGCGGCGGACAAATGAACCAGGAGGCTTATTCATGGGCTCACGGCGGCCGACCGTCGTTTTAA | 882 | 57.37 | MANRWWTSSQMGLPGVDHTSTSSSAMRIPDLGISMNDNNGAVNSGGGDDDDDRDNGGDEPKEGAVEVPTRRPRGRPAGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAHFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLTLQGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEEGGGGAQGHTSAGGGTGDGSPQGIGGGVGDLSAMPPLYNLPPNLLPNGGGGGGQMNQEAYSWAHGGRPSF | 293 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 10998556 | 10999547 | + | Carg23002-RA | Car05g01151 | 149537 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g01151 | 293 | MobiDBLite | consensus disorder prediction | 219 | 293 | - | - | |
| Car05g01151 | 293 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
| Car05g01151 | 293 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 99 | 211 | IPR005175 | - | |
| Car05g01151 | 293 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Car05g01151 | 293 | ProSiteProfiles | PPC domain profile profile. | 94 | 232 | IPR005175 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car05g01151 | Car-Chr5:10998556 | Car06g00967 | Car-Chr6:7419418 | 8.53E-72 | dispersed | |
| Car12g01114 | Car-Chr12:10848560 | Car05g01151 | Car-Chr5:10998556 | 5.68E-135 | wgd | |
| Car14g01614 | Car-Chr14:13016584 | Car05g01151 | Car-Chr5:10998556 | 2.08E-76 | wgd | |
| Car17g00156 | Car-Chr17:964357 | Car05g01151 | Car-Chr5:10998556 | 7.71E-61 | wgd | |
| Car05g01151 | Car-Chr5:10998556 | Car06g01150 | Car-Chr6:8516857 | 4.06E-93 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g01151 | - | - | csv:101220902 | 427.172 |