Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01153 ATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCAACACCACCATCAGAGTCCCACCACATCGCCGACCAATGGCCTATTACCCCCTACCCACCACCTCTCCTCCTCCGACGCCGGCCCCCACGTCGTTTACCCTCACTCCGTCCCCTCCGCCGCCGTGTCCTCCTCGCCTCTCGAGCCTGCCCGCCGTAAGAGAGGCCGGCCGAGGAAGTACGGTACGCCGGAGGAAGCTTTAGCGGCCAAGAAAGCTGCTACAGCGTCGTCTCACTCTTCGTCCTCCAAGGCTAAGAAGGACCTCGCTTCTTCTTCTTCCCTTAATGCCGTTTCCGCTTCTTCTTCCTTCTCCGCGTTTTCGAAGAAATCTCAGTTGGCTGCACTTGGTAATGCAGGCCAAGGTTTTTCGCCACATGTTATTAATGTAGCGGCTGGTGAGGATGTGGGTCAGAAAATTATGCTCTTTATGCAACAATGTAAGCGGGAAATTTGTATCCTTTCTGCATCTGGTTCGATCTCCAACGCATCTCTCCGTCAACCAGCAACATCTGGAGGAAATATTACATATGAGGGTCGTTTTGAGATTGTTTCATTATGCGGATCTTATATACGAACTGACTTCGGAGGAAAGACTGGTGGTCTTAGTGTATGTTTATCGAGTGCTGATGGCCATATAATAGGAGGGGGAGTCGGTGGACCGTTGAAGGCTGCTGGACCTGTGCAGGTCATTGTAGGTACCTTCATAATCGACCCGAAGAAGGAAGTTGGTGGTGTTAAAGGTGATGCATCTGCTGGAAAGTTGCCCTCGCCTACTGGTGGAACACCAATGTCAAATCTACGCTATGGCTCGAATGTCGACACGGGAGGTAATCAAGTCAGGGGAAATGATGAGCATCAAGGTATTGGGGAGAGTCATTTCTTGCTTCAGCCCCGGGGAGTGAACCTGACGTCGTTGCGATCTACAGACTGGAGGATGAGTCTGGATGCCACAAACAATGCTTATGATTTGACAGGTATAATCATACTACAAAAAAGACACGCATGA 1047 50.81 MEPNENQLSSYFHHQHHHQSPTTSPTNGLLPPTHHLSSSDAGPHVVYPHSVPSAAVSSSPLEPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKDLASSSSLNAVSASSSFSAFSKKSQLAALGNAGQGFSPHVINVAAGEDVGQKIMLFMQQCKREICILSASGSISNASLRQPATSGGNITYEGRFEIVSLCGSYIRTDFGGKTGGLSVCLSSADGHIIGGGVGGPLKAAGPVQVIVGTFIIDPKKEVGGVKGDASAGKLPSPTGGTPMSNLRYGSNVDTGGNQVRGNDEHQGIGESHFLLQPRGVNLTSLRSTDWRMSLDATNNAYDLTGIIILQKRHA 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11006775 11013413 - Carg23004-RA Car05g01153 149539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01153 348 MobiDBLite consensus disorder prediction 1 104 - -
Car05g01153 348 MobiDBLite consensus disorder prediction 260 280 - -
Car05g01153 348 MobiDBLite consensus disorder prediction 87 104 - -
Car05g01153 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 248 IPR005175 -
Car05g01153 348 ProSiteProfiles PPC domain profile profile. 132 272 IPR005175 -
Car05g01153 348 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01153 Car-Chr5:11006775 Car01g01608 Car-Chr1:13213409 1.73E-55 dispersed
Car12g01115 Car-Chr12:10876119 Car05g01153 Car-Chr5:11006775 1.54E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01153 - - csv:101221844 502.671