Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01210 ATGGCGCCATCGAAGAAGTTTAGAGGCGTTAGGCAACGACACTGGGGATCTTGGGTATCCGAAATTCGCCACCCTCTCCTGAAGAGAAGGGTTTGGTTGGGGACGTTTGAGACGGCGGAGGAGGCAGCGAGAGCCTACGATCAGGCCGCCGTGTTAATGAGCGGTCGAAACGCAAAAACCAACTTTCCGATGAGCGAAACGGCAGCGCCAGAATTAGAAAAGCTCAACAACATCACTACTCCATCTTCAACAAAGGGCTTATCAGAGATCCTCCACGCCAAGCTTCGAAAATGCAGCAAAGCGCCATCGCCATCGATGACGTGTCTCCGACTCGACACTGAAAATTCCCACATCGGCGTTTGGCAAAAACGCGCCGGCCAACGCTCTGACTCAAGCTGGGTCATGACCGTTCATCTCGGAAAAGAAAACTCCTCCTCCTCCTCCATCGCCGCCGCTTCCGGCGGCAATGACGACGGTGGGCGGTTGTGGAATGGTAAAAAAAGTGGTGGCGCTTCAATGGCGGGCGGTGGACCCCACATGAGAAATTTGCAGATGGATGAAGAAGAAAGAATTGCATTGCAAATGATTGAGGAGTTGCTGAGCAGAAATTATGGTAACCCATCTGAAATTCAAGTTCAAGATCATCACGAGGAAGCAAAGCTAAGCCCTTTCTAA 675 51.56 MAPSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAVLMSGRNAKTNFPMSETAAPELEKLNNITTPSSTKGLSEILHAKLRKCSKAPSPSMTCLRLDTENSHIGVWQKRAGQRSDSSWVMTVHLGKENSSSSSIAAASGGNDDGGRLWNGKKSGGASMAGGGPHMRNLQMDEEERIALQMIEELLSRNYGNPSEIQVQDHHEEAKLSPF 224
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 11426074 11427681 + Carg10907-RA Car05g01210 149596
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car05g01210 224 Pfam AP2 domain 6 50 IPR001471 GO:0003700|GO:0006355
Car05g01210 224 MobiDBLite consensus disorder prediction 144 178 - -
Car05g01210 224 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car05g01210 Car11g00423 CCT
Car05g01210 Car11g00423 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01210 Car-Chr5:11426074 Car09g00404 Car-Chr9:2243837 4.09E-74 dispersed
Car17g00833 Car-Chr17:7091802 Car05g01210 Car-Chr5:11426074 1.77E-14 dispersed
Car11g00423 Car-Chr11:2374062 Car05g01210 Car-Chr5:11426074 9.49E-80 wgd
Car04g01272 Car-Chr4:7380535 Car05g01210 Car-Chr5:11426074 1.09E-71 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3607 PF00847 AP2 3.10E-12 CL0081 Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01210 - - bhj:120080144 322.013