Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01224 ATGGCAGCCATAGCCAGAGACGAGTCAGACTACGACAGCAGCTGCTCCTCCATAACACTCCCAGACTCCACCCGTAGCTGGATGAGCAACCTAAGCTTCGGCAGCAGCAGCAGCAGCTCAGCCGCAGACGCCACTTCTCCAGTACAAAAGCCGCACAAAGCCAACGAAGTAGCATGGGAAGCGATGCGGTGGCTCCGGGGAGCAAAAGGGGAGGTGGGGTTGGAGAATTTCCGGCTGCTACGGCGGTTGGGGAGCGGAGACATTGGGAATGTTTATCTCTGCCAGATAAGGAAGCCGACGCCGACGGCGCGTGTCGGGCAGTGCTGCTACGCGATGAAAGTGGTGGACAGAGAAGCGGTGTGTGTGAGGAATAAGGAAAGAAGAGCGGAGATGGAAAAGGAGATCCTCAAAATGATCGATCATCCGTTCTTGCCCACGCTCTATGCCGCGTTTGAAGCTTCGCATTACTCTTGTTTGGTTATGGAGTTTTGTCCCGGCGGTGATTTGTACGCCGCTCGCCTCCGTCAGCCGGCGAAACGATTCTCCATTTCTTCTGCCAAATTTTATGCGGCGGAGATCATTTTAGCCCTAGAGTATTTGCACATGATGGGCATAGTTTACAGAGATTTGAAGCCGGAAAACGTGCTGGTCAGACACGACGGTCACATAATGCTGTCGGATTTCGATCTCTGTCTCAAATGCGACGTCGTTCCGAAGCTAATCCGTTCCAGAACCACCGCCTCTGACGTCACCGAACGTTACGTCCGATCTTACTCCACGTCATCAACCACCTCCTGCGCCGCCGTCCCAATTAAGCCAGTCCTCTCCTGTTTCTCCATCTCCCGCCGCAGGAAACCCACCACCGTCACGACAATCACCGAACACGCCGACGACGATGGATACAACGAGGAATTCGACACGGAACCGGAATTAGTAGCGGAGCCGATCAATGCTCGATCGAAATCCTTCGTGGGAACTCACGAATATTTGGCACCGGAGGTGATTTCCGGTCAAGGACACGGCAGCGCAGTGGATTGGTGGACGGTGGGGATTTTCTTATACGAAATGGTGTATGGAAAAACACCATTTAAAGGGGAAAACAATGAGAAGACATTAATGAACATATTGAGACAGCCATTGAGGTTTCCAAGAATTGGGTTTAGTAGCAGCAAAGAGTATGAAGAAATGGTGAAAGTTGAGGATTTAATCAAGAAGCTTTTGGTGAAGAATCCCAAGAAGAGAATTGGAAGCTTAAAGGGTTCAATTGAAATCAAAAGACATGAATTTTTCAAAGGAGTAAATTGGGCGTTAATCCGCTCGGTCCGACCTCCACATATCCCGAATTCCGACCACCTTAATCTCTCCAAAAACCCTAAATTGAGCAAACAACAACGACAACAACCCTATCAAATCCCTTCTGACCGTTTCGATTACTTCTAA 1440 50.14 MAAIARDESDYDSSCSSITLPDSTRSWMSNLSFGSSSSSSAADATSPVQKPHKANEVAWEAMRWLRGAKGEVGLENFRLLRRLGSGDIGNVYLCQIRKPTPTARVGQCCYAMKVVDREAVCVRNKERRAEMEKEILKMIDHPFLPTLYAAFEASHYSCLVMEFCPGGDLYAARLRQPAKRFSISSAKFYAAEIILALEYLHMMGIVYRDLKPENVLVRHDGHIMLSDFDLCLKCDVVPKLIRSRTTASDVTERYVRSYSTSSTTSCAAVPIKPVLSCFSISRRRKPTTVTTITEHADDDGYNEEFDTEPELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTVGIFLYEMVYGKTPFKGENNEKTLMNILRQPLRFPRIGFSSSKEYEEMVKVEDLIKKLLVKNPKKRIGSLKGSIEIKRHEFFKGVNWALIRSVRPPHIPNSDHLNLSKNPKLSKQQRQQPYQIPSDRFDYF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11483433 11485706 + Carg10893-RA Car05g01224 149610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01224 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Car05g01224 479 MobiDBLite consensus disorder prediction 450 471 - -
Car05g01224 479 Pfam Protein kinase domain 78 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01224 479 Pfam Protein kinase domain 320 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01224 479 ProSiteProfiles Protein kinase domain profile. 77 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01224 479 MobiDBLite consensus disorder prediction 448 479 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01224 Car12g01194 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01224 Car-Chr5:11483433 Car11g01352 Car-Chr11:11072588 3.92E-143 dispersed
Car20g00057 Car-Chr20:317095 Car05g01224 Car-Chr5:11483433 8.92E-80 dispersed
Car12g01194 Car-Chr12:11375556 Car05g01224 Car-Chr5:11483433 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88900 PF00069 Pkinase 1.10E-32 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01224 K08286 - csv:101202905 748.429