Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01229 ATGGTGGCCTGGATTTTGTGTTCCTTCTTGTTTCTGCTGGGTTTAAGGGCGGCGGTGGTTCTGTGGTGGCGGCCGAGGAAAATAGAACACCATTTCTGCCGCCAAGGAATCAGAGGCCCTCCCTACCGTTTCTTCATCGGAAATGTTAAGGAAATTGTCGGAATGATGATCAAAGCTTCCTCCGATCACTCTTTTCCTAATTCTTCTCATAATATTCTTCCTCGTGTTCTTCCTTTTTACCATCACTGGAAGAAGATTTACGGGTCAAAATTTCTAGTGTGGTTCGGACCAACGGTGAGATTGGCAGTGTCTGATCCAGACCTGATTCGAGAAATCTTCACATCAAAATCAGAATTCTGCGAGAAAAACGAACCTCACCCACTCGTTAAACAGCTTGAAGGCGATGGCCTCCTCAGCCTCAAAGGCCAAAAATGGGCTCTTCATCGCAAGATCATCTCTCCCTCTTTCCACATGGACAACCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTTGTGGAAATGTTGGAGAAATGGTCGGCAATGTTAGCAGATTCCGGCGAGGTGGAAATTGAAGTGTCGGAATGGTTCCAAACCCTAACGGAAGATGTCATCACTAGAACCGCCTTTGGCTCAAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCTCAACAAATGGTCCTTGCTTCTCAAGCCTTTGACAAAGTTTACATCCCGGGTTACAGATTCTTACCCACGAGAACGAATGTGAACTCGTGGCGATTGGATAGAGAAATAAGAAAATCGTTGATGAAATTGATCGACCGACGACACGAGAATTCGATCGAGTCGAGCTCGAAGGATTTATTAGGGTTGATGATTCGAGCATCCAAGTCTTCTCCTTCATCTACTATCACTGTTAATGACATTGTTGAAGAGTGCAAGGGGTTTTTCTTTGCTGGCAAACAGACCACATCTAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGATACAGGCACGTGATGAGGTACTAAGGGTGTGTGGAGCACGTGACGTACCCTCCAAAGATGATGTTACAAAGCTCAAAACGTTGAGTATGATTATCAACGAATCCTTACGGTTATATCCACCGACAGTGGCAACTATTCGACAAGCAAAAGCTGATGTGGAGTTTGGTGGTTACATGATTCCACGTGGCACTGAGTTATTGATTCCAATTTTGGCTGTTCATCATGATCAAACGATATGGGGCAATGATGTGAACGAGTTCAATCCAGGGCGATTTGCAGAAGGTGTGGCAAAGGCAGCCAATCATCGGGTTGGATTCATTCCATTTGGGCTTGGAGCTCGGACATGTATAGGCCAAAACTTGGCTCTATTGCAAGCAAAATTAGCTCTCGCACTCATTCTTCAAAAGTTCTCTTTTCGATTGGGTCCCTCTTATCAACACTCACCAGCAGTTCAGATGTTACTTTATCCACGATATGGTGCACCTATTATCTTCCAGAAGTTATCCACTTCATTGCTCCATCAAGATCAACGGTCATGA 1554 44.72 MVAWILCSFLFLLGLRAAVVLWWRPRKIEHHFCRQGIRGPPYRFFIGNVKEIVGMMIKASSDHSFPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVEMLEKWSAMLADSGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFDKVYIPGYRFLPTRTNVNSWRLDREIRKSLMKLIDRRHENSIESSSKDLLGLMIRASKSSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQIQARDEVLRVCGARDVPSKDDVTKLKTLSMIINESLRLYPPTVATIRQAKADVEFGGYMIPRGTELLIPILAVHHDQTIWGNDVNEFNPGRFAEGVAKAANHRVGFIPFGLGARTCIGQNLALLQAKLALALILQKFSFRLGPSYQHSPAVQMLLYPRYGAPIIFQKLSTSLLHQDQRS 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11516646 11519265 - Carg10888-RA Car05g01229 149615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01229 517 Pfam Cytochrome P450 79 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g01229 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01229 Car10g00532 CCT
Car05g01229 Car12g01199 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01229 Car-Chr5:11516646 Car15g00193 Car-Chr15:1029088 8.82E-115 dispersed
Car10g00532 Car-Chr10:2662511 Car05g01229 Car-Chr5:11516646 0 wgd
Car11g00434 Car-Chr11:2440131 Car05g01229 Car-Chr5:11516646 0 wgd
Car12g01199 Car-Chr12:11411729 Car05g01229 Car-Chr5:11516646 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01229 K15639 - csv:101208789 963.37