Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01293 ATGAAGATCGTGGAATTGGAAGATGCTGGGAATGATCGGGAAAATGGAATGGGTAGCGATCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTCTTTTACCCTACTCTTTTGTATAACGTTCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGATGAAATCGATCAGTTTCTCTTGCTCGGTGCAGTGCCGTTCCCCAAAGACGTGCCGAGGTTGAAGGAGCTCGGTGTCGGCGGTGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCGTTGTATTATGTGAGTTTTGCTTCTTTGTTTGCAGTTGTTCATCGCTATGGAATCGATCATTTAAAGATCCCGACGAGAGATTATTGTTTTGCTCCGAAATTTTCGGATATCAGTCGAGCTGTGGACTTCATTCACAGAAACGCGTTGTGTGGTAAAACGACGTACGTCCACTGTAAAGCGGGGCGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCGCTAGAATACGTGCGCTCGAGAAGACCACGGGTGTTGCTCGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCGTCGACCCGTTGCAAGTTCTAGCCCTCCCTCAGGAGGAGATGCAGTCCTGATTACGAAAGACGATCTAGAAGGATATCACGGTACGTGCATCGACAGTGCAGGTAGAGAACTTGCAGTTGGCCCTTGGATGGGTAAGTCAAAGCCAATGATAGCAAGGTTGTCCTGCCTCTTTTCGTCGTTGATAGTTCATGGCAGCAGTGGATCTCTCATGAAGCGTCTGCCAGTGTCGGAGGCTCGAGCTTGTTGA 888 48.54 MKIVELEDAGNDRENGMGSDQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEIDQFLLLGAVPFPKDVPRLKELGVGGVITLNEPYETLVPSSLYYVSFASLFAVVHRYGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNALCGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEAVQEYSNRRPVASSSPPSGGDAVLITKDDLEGYHGTCIDSAGRELAVGPWMGKSKPMIARLSCLFSSLIVHGSSGSLMKRLPVSEARAC 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11911778 11914941 + Carg10824-RA Car05g01293 149679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01293 295 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 138 206 IPR000387 GO:0016311|GO:0016791
Car05g01293 295 ProSitePatterns Tyrosine specific protein phosphatases active site. 159 169 IPR016130 GO:0016311|GO:0016791
Car05g01293 295 Pfam Dual specificity phosphatase, catalytic domain 119 213 IPR000340 GO:0008138|GO:0016311
Car05g01293 295 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 217 IPR020422 GO:0006470|GO:0008138
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01293 Car12g01250 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01476 Car-Chr4:8569215 Car05g01293 Car-Chr5:11911778 2.55E-06 dispersed
Car05g01293 Car-Chr5:11911778 Car16g01057 Car-Chr16:9093168 2.79E-96 dispersed
Car12g01250 Car-Chr12:11791497 Car05g01293 Car-Chr5:11911778 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01293 - - csv:101220751 522.316