Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g01293 | ATGAAGATCGTGGAATTGGAAGATGCTGGGAATGATCGGGAAAATGGAATGGGTAGCGATCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTCTTTTACCCTACTCTTTTGTATAACGTTCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGATGAAATCGATCAGTTTCTCTTGCTCGGTGCAGTGCCGTTCCCCAAAGACGTGCCGAGGTTGAAGGAGCTCGGTGTCGGCGGTGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCGTTGTATTATGTGAGTTTTGCTTCTTTGTTTGCAGTTGTTCATCGCTATGGAATCGATCATTTAAAGATCCCGACGAGAGATTATTGTTTTGCTCCGAAATTTTCGGATATCAGTCGAGCTGTGGACTTCATTCACAGAAACGCGTTGTGTGGTAAAACGACGTACGTCCACTGTAAAGCGGGGCGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCGCTAGAATACGTGCGCTCGAGAAGACCACGGGTGTTGCTCGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCGTCGACCCGTTGCAAGTTCTAGCCCTCCCTCAGGAGGAGATGCAGTCCTGATTACGAAAGACGATCTAGAAGGATATCACGGTACGTGCATCGACAGTGCAGGTAGAGAACTTGCAGTTGGCCCTTGGATGGGTAAGTCAAAGCCAATGATAGCAAGGTTGTCCTGCCTCTTTTCGTCGTTGATAGTTCATGGCAGCAGTGGATCTCTCATGAAGCGTCTGCCAGTGTCGGAGGCTCGAGCTTGTTGA | 888 | 48.54 | MKIVELEDAGNDRENGMGSDQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEIDQFLLLGAVPFPKDVPRLKELGVGGVITLNEPYETLVPSSLYYVSFASLFAVVHRYGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNALCGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEAVQEYSNRRPVASSSPPSGGDAVLITKDDLEGYHGTCIDSAGRELAVGPWMGKSKPMIARLSCLFSSLIVHGSSGSLMKRLPVSEARAC | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 11911778 | 11914941 | + | Carg10824-RA | Car05g01293 | 149679 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g01293 | 295 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 138 | 206 | IPR000387 | GO:0016311|GO:0016791 | |
Car05g01293 | 295 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 159 | 169 | IPR016130 | GO:0016311|GO:0016791 | |
Car05g01293 | 295 | Pfam | Dual specificity phosphatase, catalytic domain | 119 | 213 | IPR000340 | GO:0008138|GO:0016311 | |
Car05g01293 | 295 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 59 | 217 | IPR020422 | GO:0006470|GO:0008138 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car05g01293 | Car12g01250 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g01476 | Car-Chr4:8569215 | Car05g01293 | Car-Chr5:11911778 | 2.55E-06 | dispersed | |
Car05g01293 | Car-Chr5:11911778 | Car16g01057 | Car-Chr16:9093168 | 2.79E-96 | dispersed | |
Car12g01250 | Car-Chr12:11791497 | Car05g01293 | Car-Chr5:11911778 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g01293 | - | - | csv:101220751 | 522.316 |