Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01319 ATGGAAAATGGAAGCTTAGATGATCATATCTTGCTCCGAAATGGAAAACCTCCCCTCCCGTGGTCTATTAGATTTAGAATAGTGTTTCAAGTAGCGTCTGGGCTTGCATTCTTACACAAATCAAAGCCAGAGCCTATTATTCACAGAGATCTCAAACCGGGTAATATCTTACTTGATAGAAACTTTGTAAGCAAAATCTCAGACGTTGGAATGGCTAAGATCATCGGTGATATCGTGCCTGACAATGTGACGGAGTATCGAAACACCATTCTTGCTGGGACTCTGCATTACATGGATCCTGAATATCAGAGAACTGGCACACTCCGACCGAAGTCGGATACGTATGCGCTCGGAGTAACAATTCTGCAGTTGTTGACCGGGCGGCAGCCACACGGTCTTCTTCTGGCTGTCGAGAACTCCATCGCAAGCGCCTCGCTTGCAGATATTCTAGATAAGTCGATTACTGACTGGCCTGTAGCTGAAGCTGAGGAGCTAGCTGGACTGGCACTGAAGTGCTTGAAGCTTAGATGCAGGGATAGGCCAGATCTTGAAACTGAGGTTCTTCCAGTCCTTAAAAGGCTTGTTGATTTTGCAGATACGTTTCAGAAAGGTGCTGCCAATCCCCCAAGCCACTACTTCTGCCCAATCCTCCAGGAAGTAATGGAGGATCCTTATATAGCAGCCGACGGTTTTACTTACGAGTACGAAGCCATTAAAGCGTGGCTCGAGAAATACGACGTATCGCCTGTGACGAAGCTTAAGCTCCAGCATTCTATGTTTATTCCTAACTATACTCTGCGTTCTGCCATACAAGAGTGGAGGTCAAGACTGACATTTTCCTCTTCCTAA 849 46.17 MENGSLDDHILLRNGKPPLPWSIRFRIVFQVASGLAFLHKSKPEPIIHRDLKPGNILLDRNFVSKISDVGMAKIIGDIVPDNVTEYRNTILAGTLHYMDPEYQRTGTLRPKSDTYALGVTILQLLTGRQPHGLLLAVENSIASASLADILDKSITDWPVAEAEELAGLALKCLKLRCRDRPDLETEVLPVLKRLVDFADTFQKGAANPPSHYFCPILQEVMEDPYIAADGFTYEYEAIKAWLEKYDVSPVTKLKLQHSMFIPNYTLRSAIQEWRSRLTFSSS 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12036601 12037723 + Carg10798-RA Car05g01319 149705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01319 282 Pfam Protein kinase domain 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01319 282 ProSiteProfiles U-box domain profile. 207 280 IPR003613 GO:0004842|GO:0016567
Car05g01319 282 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01319 282 Pfam U-box domain 209 274 IPR003613 GO:0004842|GO:0016567
Car05g01319 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01319 Car12g00600 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01319 Car-Chr5:12036601 Car02g00722 Car-Chr2:5353134 2.79E-89 dispersed
Car05g01319 Car-Chr5:12036601 Car15g01221 Car-Chr15:9532359 9.69E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88906 PF00069 Pkinase 6.10E-24 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01319 - - cpep:111805862 542.732