Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01337 ATGAGCGCACGAAACAGGCTCCCATTCACTGCAGCTCAATGGCAAGAGCTAGAACACCAAGCCCTCATCTTCAAGTACATGGTCTCCGGCATCCCCGTCCCTCCTGATCTGCTCTACACCATCAAGAGATCCTCTTTGGACACTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGACGTTGGATGGAACTTCGTGCAGATGGGTTCGGGGAGGAAAATCGACCCAGAGCCTGGAAGGTGCAGAAGAACAGACGGCAAAAAATGGAGATGCTCCAAAGAGGCATATCCAGATTCTAAATACTGTGAGAGACATATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAACCAACAACAACAATAACTGCTCTAACCTCTAATCCATCTACCCCACCCATCTCCTCCATCACCCACAACTCCACCGCTTCACTCAGCACCAACTCCTTTCCCTCTGAAATCCATACCCATTCTTGTTTCAATACTCCTCCTCCTCCTCACCCTTTTCTCTATCAACATGGCTCCTTCTCTAGGCCCCCTGGTTCTGCCCATTTGCAGCACAACTCCAACCCATCCTTACTTCTGGACCCTCCTGCAGATTACAGAAGAAGAAATAGGTATGTTTATGGGGCGAAGGAAGATGTTGATAAGCATCCATTTGTATCGGAAGAACATTCTGGGAACATGAGAGGCTTCTCTGCTTCGTCTATGGAAGATCCCTGGCAGCTAACTCCTCTGACAATGAGTTGTTCTTCCTCATCCCCCAGACACAAGAACTGCTCAGCTTTACAAGGTGACTACTCTTCTTACTTGCAGCTGCAGAGCTTTGGCGGTTCCCCTAAGCAAGTGAAGCAAGACGAGCATTACTACGCGGTGGGAAAATATAATGAGATGCAGAGTAAGATGGACAGGGAGAAACCGGAGAAGACTATGCATCACTTCTTTGGTGAATGGTCTCCTAAAGACAGGGAGTCGTGGGTTGATTTGGATGATAAGTCATCCAATACTGGCTCAGTTTCTGAAACTCGGCTTTCAATGTCTATTCTTAACTCGTCGCAGCATGACTTCTCCATTTTCGGTTCCAATAAGCATAATGAAAACTGA 1119 47.27 MSARNRLPFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTIKRSSLDTPFISRLFPHQYPDVGWNFVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKPTTTITALTSNPSTPPISSITHNSTASLSTNSFPSEIHTHSCFNTPPPPHPFLYQHGSFSRPPGSAHLQHNSNPSLLLDPPADYRRRNRYVYGAKEDVDKHPFVSEEHSGNMRGFSASSMEDPWQLTPLTMSCSSSSPRHKNCSALQGDYSSYLQLQSFGGSPKQVKQDEHYYAVGKYNEMQSKMDREKPEKTMHHFFGEWSPKDRESWVDLDDKSSNTGSVSETRLSMSILNSSQHDFSIFGSNKHNEN 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12104148 12105462 - Carg10779-RA Car05g01337 149723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01337 372 MobiDBLite consensus disorder prediction 178 203 - -
Car05g01337 372 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car05g01337 372 MobiDBLite consensus disorder prediction 184 198 - -
Car05g01337 372 Pfam WRC 77 119 IPR014977 -
Car05g01337 372 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car05g01337 372 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01337 Car11g00602 CCT
Car05g01337 Car10g00681 CCT
Car05g01337 Car11g00602 ECH
Car05g01337 Car10g00681 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01337 Car-Chr5:12104148 Car12g01280 Car-Chr12:11916386 2.89E-32 dispersed
Car18g00624 Car-Chr18:7457300 Car05g01337 Car-Chr5:12104148 6.30E-27 dispersed
Car01g00027 Car-Chr1:139119 Car05g01337 Car-Chr5:12104148 9.93E-72 wgd
Car10g00681 Car-Chr10:3535618 Car05g01337 Car-Chr5:12104148 2.11E-113 wgd
Car11g00602 Car-Chr11:3289920 Car05g01337 Car-Chr5:12104148 1.32E-115 wgd
Car14g01092 Car-Chr14:9566099 Car05g01337 Car-Chr5:12104148 2.48E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3617 PF08879 WRC 7.80E-21 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01337 - - cmos:111450713 743.421