Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01346 ATCTATTTTGGAAGGCCAAGAGTGAGACGAAAAAAAAGGTTCGCCCAACACACAGTCGCAGACAACCACGCAATTGTTCGAACAGCGGCTGGTTTGTATCCAGACGTGTTTTCCATTTTCCGTTCCGGCTCTGCAATGGCCGCTGTTCGAATCGTGTTCCTGTTCCTCCTCCTGTGTGGTCTCCCCCTGTCGTGTCCCCTGTCCGAGAAGGAGGCCCTCCTCAAGCTGAAGCAATCCTTCACCCATTCCGGATCCCTCAACTCATGGAACGCGGACTCAGTCCCCTGCTCGGCTCGATGGACTGGCATCATCTGCAACAAGGGCGTCATCACCGGCCTACATCTCTCCGGCCTCCAACTCTCAGGCACCATTGACGTGGAAGCTCTCATCCAGCTCCCCCGCCTGAGAACCATCAGCTTAATCGACAACAAATTCACCGGCCCCATTCCGGAGTTCAACAAAATCGGGGTTCTCAAGGCGCTCCTCCTCACCCGGAACCAATTCTTCGGGGATATCCCGGACGATTTCTTTTCAACCCTCACCTCCCTCAAGAAGGTATACCTCTCCTCCAACAACTTCTCCGGGAACATTCCAAATTCTCTGGCCCAACTCTCCCATCTCCTCGAACTCCACCTCGACAGAAACCAATTCTCCGGCCCTCTCCCCAACCTCAAATACGCCTCCATTATAACCTCCCTCGATGTCTCCAACAACAACCTCCAGGGCCAAATACCCGACAGCCTCTCCAAATTCGACGCAAAGGCATTCGCCGGAAATGAAGGCCTCTGCGGGAACCCACTCCCCAAATCCTGCGAAGACAATGCTTCTCCTCCTCCTCCTCCTCCTGGGGAGTCCCAAGCCAACATCTCCAAGTTGGTAGTGGCTTCATTAATAGCCGTGGTTGTGTTTCTGATGGTGTTTATATTTCTGAGCGCGTCGAAGCGCAGAGAGGACGAGTTCAGCATGCTGGGGAGGGATCGGGAGGAGGTGGTGGAGGTGCACGTGCCTGGTTCAGCCCAGGATAGGCAGTCGATTAGGAGAGGAGGTGGGGACTCCAGGAGAGGCTCCAAACAGGGGAAGGCAGGGATGACCGATCTTGTGGTGATCAACGACGAGAGGGGTACGTTTGGGTTGGCGGATTTGATGAAGGCGGCAGCGGAGGTGCTGGGGAATGGCGGGTTGGGGTCGGCGTACAAGGCGGTCATGTCGAACGGGCTGTCAGTGGTGGTGAAGAGAATGAGAGAAATGAACAAAATAGGGAAGGATGGGTTCGATGCGGAGATGAGGCGGCTGGGAAGACTGCGGCATCAGAACATACTAACGCCTTTGGCGTATCATTATAGGAGAGAGGAGAAGCTGGTGGTGTCAGAGTACGTTCCAAAGGGCAGCCTGTTGTACGTGTTGCACGGTGACCGTGGAGCCTGCCATGCTGACCTTGACTGGGAGACCCGGCTAATAATTGTGAAGGGGATCGCAAGTGGTCTGGGGTTCCTCCATTCGGAATTCGCGACCTACGATCTGCCGCATGGGAATCTCAAGTCCAGCAACGTTCTTCTATGCGACGACTACGAGCCACTTCTGAGCGACTACGCGTTTCATCCGCTCATCAATCCCAGCAATGCGAGCCAGGCAATGTTCGCCTACAAAGCCCCCGAGTACGCCCAGAACCAGGAAGTTTCTCCCAAGTCTGATGTTTATTGCCTTGGAATTATCATTCTGGAAATAATGACCAGCAAGTTTCCTTCTCAATATCTAACCAATGGCAAGGGTGGCACCGATGTGGTGCAGTGGGTCTCCTCCGCAGTAGCCGAGAAGAGGGAGGCGGAACTCATCGACCCTGAGATTGCAAACGACGCCCCCGACGAACTGGATCGAATGGTCCAGCTACTCACAATCGGCGCGGATTGCACTCACGCCACTCCTCAGCAACGGCCGGATATGAAGGAAGCCATTAGGAGAATAGAAGAGATTTGA 1974 54.51 IYFGRPRVRRKKRFAQHTVADNHAIVRTAAGLYPDVFSIFRSGSAMAAVRIVFLFLLLCGLPLSCPLSEKEALLKLKQSFTHSGSLNSWNADSVPCSARWTGIICNKGVITGLHLSGLQLSGTIDVEALIQLPRLRTISLIDNKFTGPIPEFNKIGVLKALLLTRNQFFGDIPDDFFSTLTSLKKVYLSSNNFSGNIPNSLAQLSHLLELHLDRNQFSGPLPNLKYASIITSLDVSNNNLQGQIPDSLSKFDAKAFAGNEGLCGNPLPKSCEDNASPPPPPPGESQANISKLVVASLIAVVVFLMVFIFLSASKRREDEFSMLGRDREEVVEVHVPGSAQDRQSIRRGGGDSRRGSKQGKAGMTDLVVINDERGTFGLADLMKAAAEVLGNGGLGSAYKAVMSNGLSVVVKRMREMNKIGKDGFDAEMRRLGRLRHQNILTPLAYHYRREEKLVVSEYVPKGSLLYVLHGDRGACHADLDWETRLIIVKGIASGLGFLHSEFATYDLPHGNLKSSNVLLCDDYEPLLSDYAFHPLINPSNASQAMFAYKAPEYAQNQEVSPKSDVYCLGIIILEIMTSKFPSQYLTNGKGGTDVVQWVSSAVAEKREAELIDPEIANDAPDELDRMVQLLTIGADCTHATPQQRPDMKEAIRRIEEI 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12132090 12134156 - Carg10770-RA Car05g01346 149732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01346 657 Pfam Protein kinase domain 387 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01346 657 ProSiteProfiles Protein kinase domain profile. 383 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01346 657 Pfam Leucine rich repeat N-terminal domain 68 106 IPR013210 -
Car05g01346 657 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Car05g01346 657 MobiDBLite consensus disorder prediction 335 361 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01346 Car12g01296 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01346 Car-Chr5:12132090 Car10g00326 Car-Chr10:1623298 1.27E-139 dispersed
Car01g00001 Car-Chr1:9182 Car05g01346 Car-Chr5:12132090 3.14E-142 wgd
Car12g01296 Car-Chr12:11984585 Car05g01346 Car-Chr5:12132090 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88908 PF00069 Pkinase 5.00E-26 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01346 - - cmo:103498999 1049.27