Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00030 ATGACTTGTGGGGCTCGATTGCTTGTGTTGGATTTTGTGTTGGCTTTTATGTGGGTATGGTCGGGGACTTTGATTAAGATCTTTGTTTTTGGGACATTGGGATTTGGAAATGATCCGGTCGGTGAGATTGTGAAGGCTTCCTTTTCGATTCTCAACATGTTTGTGTTTGCGTTTTTGTCGAAAATTTGGAATGGGGCTTCTTACAATCCTCTTAACATCTTGTCTGATGCTTTTTCTGGGGATTCCAGTAGCTTTCTCTTCGTTGCTGGTGCCAGAATCCCTGCTCAGGTACTTGGAGCCATTAGTGGTGTTAGGCTGATTATCCAGACAATCCCTGAAGCAGGGCGAGGGCCTCATTTGAACGTTGGCATCCATCACGGTGCTCTAACAGAAGGATTGTTAACATACGGCATTGTCCTAATCTCGCTTGGACTGTCCACGACACTCCCAGGAAATTTCTTCATGAAGACATGGATCTCCAGCTGCTCCAAGTTAACTCTTCAGATTCTTGGTTCTGACTTAACCGGTGGCTGCATGAACCCTGCCTCTGTAATAGGATGGGCGTATGCTCGTGGGGAACATATAACCAAAGAACACCTTTTTGTATACTGGATTGCTCCAATTCAAGGAACCATACTTGCCGTGTGGACGTTTAAGTTACTATTTCGACAACCGAACGAGGAGAAAGTGAACACGAAGAAGAAATCTGAATGA 714 44.96 MTCGARLLVLDFVLAFMWVWSGTLIKIFVFGTLGFGNDPVGEIVKASFSILNMFVFAFLSKIWNGASYNPLNILSDAFSGDSSSFLFVAGARIPAQVLGAISGVRLIIQTIPEAGRGPHLNVGIHHGALTEGLLTYGIVLISLGLSTTLPGNFFMKTWISSCSKLTLQILGSDLTGGCMNPASVIGWAYARGEHITKEHLFVYWIAPIQGTILAVWTFKLLFRQPNEEKVNTKKKSE 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 249754 251563 - Carg01280-RA Car06g00030 149766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00030 237 Pfam Major intrinsic protein 93 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00213 Car06g00030 CCT
Car06g00030 Car07g01141 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00213 Car-Chr3:3441809 Car06g00030 Car-Chr6:249754 1.63E-36 dispersed
Car06g00030 Car-Chr6:249754 Car07g01141 Car-Chr7:6855339 8.11E-29 dispersed
Car14g00443 Car-Chr14:2324659 Car06g00030 Car-Chr6:249754 1.17E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00030 K09875 - csv:101214379 376.326