Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00039 ATGGAGATCTTACAGGCTCTCGATGCTCAGGTTCTCGTTGGCTTAGCCGCCGCCCTGGTTGCCATTGTTGCTGGTGCCTTTTTCCTTGTCTCCTCCAGAAAACCAGCATCCACAGCCTGCTTGGATCCTGAGAACTTTAAGGAGTTTAAGCTTGTTAAGCGCACGAAGCTGAGCCATAATGTGGCAAAGTTCACTTTTATACTTCCCAAGACCGATTCAATTCTTGGTCTTCCTATTGGACAGCATCTAAGTTGCAGGGGAAAGGATAGCCAAGGTGAAGAGGTTATTAAATCTTACACTCCAGTTACCTTGGACTCTGATGTTGGATATTTTGAGCTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCGCATCATTTTCGAGAAATGCGTATGGGGGACTTTCTTGCTGTGAAGGGACCAAAGGGAAGTTTTAAGTATCAACCTGGTAAAGTTAGAGCATTTGGGATGCTCGCTGGAGGCTCTGGCATTACACCCATGTATCAAGTTGCTCGGTCTATATTAGAAAACCTGAACGACAAGACACAGATTCACCTTATTTATGCCAATGTTACACTTGAAGATATTCTTTTGAAGGAGGAATTGGATCTTCTTGCCAAGAGATACCCTGATCGCTTCCAGATCTACTATGTCTTGAACCAGCCTCCTAAAGTTTGGGATGGCGGCGTCGGGTTTGTGTCGAAGGAAATGATTCGAGCGCATTGCCCTGCACCTGCCTCTGACATTCAGATTTTGCGGTGTGGACCGCCGCCGATGAACAAGGCCATGGCTGCCCACCTTGATGCTCTTGGATATACACCTGAAATGCAGTTCCAGTTCTAG 843 46.38 MEILQALDAQVLVGLAAALVAIVAGAFFLVSSRKPASTACLDPENFKEFKLVKRTKLSHNVAKFTFILPKTDSILGLPIGQHLSCRGKDSQGEEVIKSYTPVTLDSDVGYFELVIKMYPQGRMSHHFREMRMGDFLAVKGPKGSFKYQPGKVRAFGMLAGGSGITPMYQVARSILENLNDKTQIHLIYANVTLEDILLKEELDLLAKRYPDRFQIYYVLNQPPKVWDGGVGFVSKEMIRAHCPAPASDIQILRCGPPPMNKAMAAHLDALGYTPEMQFQF 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 295623 299231 + Carg01271-RA Car06g00039 149775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00039 280 Pfam Oxidoreductase NAD-binding domain 157 263 IPR001433 GO:0016491
Car06g00039 280 Pfam Oxidoreductase FAD-binding domain 49 147 IPR008333 -
Car06g00039 280 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 44 148 IPR017927 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00161 Car06g00039 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00161 Car-Chr3:2905433 Car06g00039 Car-Chr6:295623 9.74E-167 dispersed
Car06g00039 Car-Chr6:295623 Car20g00007 Car-Chr20:34752 1.17E-124 dispersed
Car06g00039 Car-Chr6:295623 Car07g01094 Car-Chr7:6507820 3.56E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00039 K00326 - csv:101212931 476.863