Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g00058 | ATGGAAAATCACGGCGATGACCCAAACAGTCCAAATCTCCGCTCCGACAGGGCGGAGCCGGTGAGATCACGGTGGACGCCGAAGCCGGAGCAGATTCTGATTTTGGAGTCCATTTTCAACAGTGGAATGGTTAATCCACCCAAGGATGAGACCGTTAGAATTAGAAAGCTGCTTGAGAAATTTGGCTCTGTCGGAGATGCCAATGTTTTCTACTGGTTTCAAAACCGCCGCTCTCGGTCTCGCCGCCGCCAACGCCAGCTGCAGGCAGCTGCAAGCCACCAAGGTGGCAGTGCAATTCATTATGACAGTGGTTGTAGCGGTGGCAGTGTCATGAATTTTGCTCCTTCCTCTTCTTACCTTGGAGAAGGAGGCTCCTCCTCCTCCTCCTCTTCCGCCTCCGCCTCCGGCGGCGGCGGCGGTTTTTCGATGACCGATCACATGGGTATCTCTGAAATTGATCAGCCGATGGTTGTAACCCCCTCGTTTTGCCCTTCAGCAACCTCGAATTTAGAGTTCCAATCAGGTTATATTATAATATTCATAAATGGAGTTCCGACAGAAGTGCCAAAAGGAGCGGTGGACATGAAGGCTATGTTTGGGGATGACACAGTGTTGGTTCACTCCTCAGGACTCCCAGTTCTTACCAATGAATTTGGAATATCACTGCACAGTTTGCAGCATGGTGAAACCTACTTTCTGGTAATTATTCTCTCTCTTTCTCTGTTTTTGAGCCTCTTAAACTTTCTATCTTCCTTCTATAATTCAAACAAACACATAATCTAA | 783 | 48.28 | MENHGDDPNSPNLRSDRAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAASHQGGSAIHYDSGCSGGSVMNFAPSSSYLGEGGSSSSSSSASASGGGGGFSMTDHMGISEIDQPMVVTPSFCPSATSNLEFQSGYIIIFINGVPTEVPKGAVDMKAMFGDDTVLVHSSGLPVLTNEFGISLHSLQHGETYFLVIILSLSLFLSLLNFLSSFYNSNKHII | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 380691 | 381796 | - | Carg01252-RA | Car06g00058 | 149794 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g00058 | 260 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Car06g00058 | 260 | Pfam | Homeodomain | 22 | 82 | IPR001356 | GO:0003677 | |
Car06g00058 | 260 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Car06g00058 | 260 | ProSiteProfiles | 'Homeobox' domain profile. | 18 | 83 | IPR001356 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g00058 | Car-Chr6:380691 | Car07g00176 | Car-Chr7:1016031 | 2.48E-17 | dispersed | |
Car14g00419 | Car-Chr14:2139594 | Car06g00058 | Car-Chr6:380691 | 8.16E-107 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3626 | PF00046 | Homeodomain | 6.80E-13 | CL0123 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g00058 | - | - | cmos:111450454 | 400.593 |