Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00066 ATGGATGATCCTTCCACTAATTTCTTCACAGATCTCTTCAAATTCAACTATCCCACTAATTTCCACCACCACCACAACCCTCCTCCTTCAAATCCTCCTCCCAATTTCTTCCACGCGCCGCCGTCTTCTCCTCCACTCCGGCAGGCCCTCCCCCTCCTCCGCCTCAGCCCCACAAGGTCATCTAAAGATCACCACCTCTCTTTTACTTCCTCCTCGGCCATGGAAATTGACAACAACAACAACAACGATGACGAGGACGTTTCGGTGACGGTTGCACTTCACATAGGGCTTCCAAGCTCTAATGCCTCAGAAATGGCGACCCTTTTGGTGTCTGATAATAATAATCAAAATGAGGAAGAAGATCAATTGGAAGAAGAATTAGAAGAAGAAGAAGATGAAGATGAAGAACAGCAACAAGCTGGTATCACAATTTCTGGATTCTCTTTGAGTAGCAGACTCAATAAAGGACAGTATTGGATCCCTACTCCTTCTCAAATCCTCATTGGTCCTACTCAATTTTCTTGTCCTGTTTGTTTCAAAACCTTCAATCGATACAACAACATGCAGATGCACATGTGGGGGCATGGTTCACAATACAGGCGAGGCCCGGAGTCCTTGAGAGGCACACAGCCAACGGGGATGCTCAGGCTGCCGTGCTACTGCTGCTCGCCGGGCTGCCGCAACAACATCGACCATCCGAGAGCGAAGCCATTGAAGGACTTCAGAACGCTTCAAACGCATTACAAACGCAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGGAAAGCCTTTGCTGTTAGAGGGGATTGGAGAACTCATGAGAAGAATTGTGGGAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCATAAGAGATCGCTTAAAGATCATATCAAAGCCTTTGGAAATGGGCATGCTGCTTATAATAGTAATATTAATAACAACGGTGATCATCGTCAACATCATCATCATCATCACGCGTTCGATGAGGAGGACGAGTCGGCTTATTCTGAAGTCGAGGAAGATCGTGATTGA 1044 46.07 MDDPSTNFFTDLFKFNYPTNFHHHHNPPPSNPPPNFFHAPPSSPPLRQALPLLRLSPTRSSKDHHLSFTSSSAMEIDNNNNNDDEDVSVTVALHIGLPSSNASEMATLLVSDNNNQNEEEDQLEEELEEEEDEDEEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNSNINNNGDHRQHHHHHHAFDEEDESAYSEVEEDRD 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 433765 435191 - Carg01244-RA Car06g00066 149802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00066 347 Coils Coil 106 140 - -
Car06g00066 347 MobiDBLite consensus disorder prediction 115 145 - -
Car06g00066 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 257 277 IPR013087 -
Car06g00066 347 ProSitePatterns Zinc finger C2H2 type domain signature. 175 195 IPR013087 -
Car06g00066 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 173 200 IPR013087 -
Car06g00066 347 MobiDBLite consensus disorder prediction 25 45 - -
Car06g00066 347 MobiDBLite consensus disorder prediction 58 82 - -
Car06g00066 347 MobiDBLite consensus disorder prediction 314 347 - -
Car06g00066 347 MobiDBLite consensus disorder prediction 23 45 - -
Car06g00066 347 MobiDBLite consensus disorder prediction 62 82 - -
Car06g00066 347 MobiDBLite consensus disorder prediction 117 138 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00066 Car14g00406 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00088 Car-Chr3:1119536 Car06g00066 Car-Chr6:433765 4.13E-135 dispersed
Car06g00066 Car-Chr6:433765 Car20g00061 Car-Chr20:336849 5.69E-130 dispersed
Car14g00406 Car-Chr14:2050856 Car06g00066 Car-Chr6:433765 4.68E-137 wgd
Car17g00906 Car-Chr17:7471048 Car06g00066 Car-Chr6:433765 3.74E-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3629 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00066 - - csv:101208110 435.647