Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g00074 | ATGGCTTCCTCCAATATTAAAACCAGCTCCATCAGTGAAGAAGAAGAAGAAGCACGACAACTACTCCATCATCATCATCATCAACAACAACAACACCAACAACAACAACATCAGCTTTTGCAAACTCCAAACTTTGTCATCCCCAAAAATCCATCATCATTCAGCTTCCAAAATCAAGACTTTCATCATCATCAATTACCTTTCTCCATGAATCTCCCTTCCATCTCTCCAAATTTCATAAGCAAAGATGGAGGAGGTGATGATTTGGGAGAATTGGATCATGCCCTCTTTCTATATCTTGATGGACAAGAACCCTCCACAAACATCACCCAACAAGATCAAAGACAGAGTACGGGGATGAGGCCGCCGACGTTGAACATCTTCCCGTCGCAGCCGATGCACGTCGACCCATTACCAGCAAAAGCAAACACAGCATTGGTTAACCATGGTGATTCAAAGATCAAAGCATCAGAGCCATCCAAGGAGTTGGCCAACCAACGCAGCGGTGGAGCCACTCCATCCGGACCACCCCCAAACCCAAACCCAAACCCAAACCCAACTACAACAATCACCGAACCTCATGCCAAACCTCCAAAACGTGAGGCTAATAAGAAAGGGCTGACCTCAAGCTCAGAGCAAGAAGGACCCAAAACTCCAGACCCCAAGACTCTTAGAAGGCTGGCTCAGAACCGAGAGGCCGCAAGAAAAAGCAGGCTAAGAAAAAAGGCCTATGTTCAGCAGTTGGAGCTGAGTAGGATTAAGCTGACGCAGCTGGAGCAAGAGCTACAAAGAGCAAGAACTCAGGGTATGCTTGTGGGTGGCGGAGCAGCCATTTTAGGAGCTGACCAAGGACTTCCCCCCGGTTTCCATAACCTCAGCTCCGATGCTGCGGTGTTCGACATTGAGTATAGGCGGTGGCAGGAGGAGCACCACCGGCTGATGTGCGAGCTCCGAGCAGCTGTGCAGGAGCATTTACCGGAAAACGAGCTCCGATTATTTGTCGACAACTGCCTTGTCCACTACGACGAGGTTTTGAACTTGAAAATGATGGTGGCTAAGTCCGACGTCTTCCACCTCGTCTCCGGCATGTGGAAGACGCCGGCGGAGAGATGCTTCCTGTGGATGGGCGATTTTAGGCCATCTGAACTCCTTAAGATAGTAATGGGTGAAATAGAGCCATTAACTGAGCATCAAATATTGAACATTTGTGGATTGCAACAATCCACACAAGAGAGCGAAGAGGCATTGTCTGAAGGCCTTGAAGCCCTTAACCAATCCTTATCAGACACCATCGCCGCTGATTCATTGAGTAACCCTCCCAATATGGCTAACTACATGGGCCAGATGACCTTAGCCATCAACAAGCTCTCGACCCTCGAAGGCTTTGTACGACAGGCAGATCATTTGAGACATCAAACCATTCATCGATTGCATCAAATGTTGACGACCCGACAAGCTGCACGATGTCTGCTAGCCATTGCGGAGTATTTTCATCGGCTTCGAGCTCTTAGTTCCTTGTGGTTAGCTCGACCGAGGCAGGATTGA | 1545 | 48.61 | MASSNIKTSSISEEEEEARQLLHHHHHQQQQHQQQQHQLLQTPNFVIPKNPSSFSFQNQDFHHHQLPFSMNLPSISPNFISKDGGGDDLGELDHALFLYLDGQEPSTNITQQDQRQSTGMRPPTLNIFPSQPMHVDPLPAKANTALVNHGDSKIKASEPSKELANQRSGGATPSGPPPNPNPNPNPTTTITEPHAKPPKREANKKGLTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLELSRIKLTQLEQELQRARTQGMLVGGGAAILGADQGLPPGFHNLSSDAAVFDIEYRRWQEEHHRLMCELRAAVQEHLPENELRLFVDNCLVHYDEVLNLKMMVAKSDVFHLVSGMWKTPAERCFLWMGDFRPSELLKIVMGEIEPLTEHQILNICGLQQSTQESEEALSEGLEALNQSLSDTIAADSLSNPPNMANYMGQMTLAINKLSTLEGFVRQADHLRHQTIHRLHQMLTTRQAARCLLAIAEYFHRLRALSSLWLARPRQD | 514 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 464387 | 468033 | - | Carg01236-RA | Car06g00074 | 149810 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g00074 | 514 | Pfam | Seed dormancy control | 314 | 388 | IPR025422 | GO:0006351|GO:0043565 | |
Car06g00074 | 514 | ProSiteProfiles | DOG1 domain profile. | 296 | 510 | IPR025422 | GO:0006351|GO:0043565 | |
Car06g00074 | 514 | MobiDBLite | consensus disorder prediction | 173 | 187 | - | - | |
Car06g00074 | 514 | Pfam | bZIP transcription factor | 222 | 258 | IPR004827 | GO:0003700|GO:0006355 | |
Car06g00074 | 514 | Coils | Coil | 241 | 268 | - | - | |
Car06g00074 | 514 | Coils | Coil | 303 | 323 | - | - | |
Car06g00074 | 514 | MobiDBLite | consensus disorder prediction | 103 | 125 | - | - | |
Car06g00074 | 514 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Car06g00074 | 514 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 220 | 264 | IPR004827 | GO:0003700|GO:0006355 | |
Car06g00074 | 514 | MobiDBLite | consensus disorder prediction | 10 | 24 | - | - | |
Car06g00074 | 514 | MobiDBLite | consensus disorder prediction | 103 | 225 | - | - | |
Car06g00074 | 514 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 225 | 240 | IPR004827 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car06g00074 | Car14g00399 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g00074 | Car-Chr6:464387 | Car14g00465 | Car-Chr14:2438490 | 4.20E-130 | dispersed | |
Car13g00231 | Car-Chr13:4225480 | Car06g00074 | Car-Chr6:464387 | 1.40E-114 | transposed | |
Car18g00615 | Car-Chr18:7367620 | Car06g00074 | Car-Chr6:464387 | 1.86E-110 | transposed | |
Car14g00399 | Car-Chr14:2012271 | Car06g00074 | Car-Chr6:464387 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3630 | PF14144 | DOG1 | 1.90E-30 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g00074 | K14431 | - | csv:101204923 | 795.423 |